RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 KIAA1671Q9BY89 1806 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 GBF1Q92538 1859 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 KIF4AO95239 1232 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 CDC25BP30305 580 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 PBX1P40424 430 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH8-208ENST00000582980 RABGGTBP53611 331 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 LRMPQ12912 555 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 ELAVL2Q12926 359 aaKnown RBP13.3□□□□□ -0.28
CDH8-208ENST00000582980 TRIM14Q14142 442 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 WDR72Q3MJ13 1102 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 SPOPLQ6IQ16 392 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 DSTYKQ6XUX3 929 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
CDH8-208ENST00000582980 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 TMEM130Q8N3G9 435 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 PPM1KQ8N3J5 372 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 COLGALT1Q8NBJ5 622 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 RABGGTAQ92696 567 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 CLP1Q92989 425 aaKnown RBP13.3□□□□□ -0.28
CDH8-208ENST00000582980 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH8-208ENST00000582980 FAM207AQ9NSI2 230 aaPredicted RBP13.3□□□□□ -0.28
CDH8-208ENST00000582980 GDAP2Q9NXN4 497 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 NXF1Q9UBU9 619 aaKnown RBP13.3□□□□□ -0.28
CDH8-208ENST00000582980 STK39Q9UEW8 545 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 MSRAQ9UJ68 235 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 ADAM28Q9UKQ2 775 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH8-208ENST00000582980 SNX9Q9Y5X1 595 aa13.3□□□□□ -0.28
CDH8-208ENST00000582980 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH8-208ENST00000582980 A0A1W2PPC1 479 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 HUS1O60921 280 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 TPM1P09493 284 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 ODC1P11926 461 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 KLK7P49862 253 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 MFAP3P55082 362 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 YWHAEP62258 255 aaKnown RBP13.29□□□□□ -0.28
CDH8-208ENST00000582980 GCNT1Q02742 428 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 CUL2Q13617 745 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 KLHDC7AQ5VTJ3 777 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 DPH6Q7L8W6 267 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 CACNA2D4Q7Z3S7 1137 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 SLC39A11Q8N1S5 342 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 C3orf58Q8NDZ4 430 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 HASPINQ8TF76 798 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 MMS19Q96T76 1030 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
CDH8-208ENST00000582980 CYP3A43Q9HB55 503 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
CDH8-208ENST00000582980 SIX2Q9NPC8 291 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 SPG21Q9NZD8 308 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 DSEQ9UL01 958 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 NLRC5Q86WI3 1866 aa13.29□□□□□ -0.28
CDH8-208ENST00000582980 TNRC18O15417 2968 aaPredicted RBP13.29□□□□□ -0.28
CDH8-208ENST00000582980 LINC01553A4QN01 128 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 NT5C1B-RDH14C9J2C7 533 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 CYB561D2O14569 222 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 SPTLC1O15269 473 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 LRRN2O75325 713 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 CA3P07451 260 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 UCHL3P15374 230 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 CTNNB1P35222 781 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 PBX3P40426 434 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 KRT17Q04695 432 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 TIGD5Q53EQ6 642 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 SMYD5Q6GMV2 418 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
CDH8-208ENST00000582980 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 FUT10Q6P4F1 479 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 SCARA5Q6ZMJ2 495 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 PPFIBP1Q86W92 1011 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 FMNL3Q8IVF7 1028 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 ARHGEF19Q8IW93 802 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 TMEM86AQ8N2M4 240 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 TTC39CQ8N584 583 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 TOP6BLQ8N6T0 577 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 APPL2Q8NEU8 664 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 TATDN2Q93075 761 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 IGSF21Q96ID5 467 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 SENP8Q96LD8 212 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 PLVAPQ9BX97 442 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 DNAI2Q9GZS0 605 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 GANQ9H2C0 597 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
CDH8-208ENST00000582980 UBE2TQ9NPD8 197 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms