RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 C4orf47A7E2U8 309 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 H0Y626 953 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 H7C4K7 107 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 M0R2N6 131 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 SYN3O14994 580 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 N4BP3O15049 544 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 B4GALT5O43286 388 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 TRIM16O95361 564 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 TDP2O95551 362 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 FGF19O95750 216 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 CAVIN2O95810 425 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 XRCC6P12956 609 aaKnown RBP eCLIP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 GCFC2P16383 781 aaKnown RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 VIPR2P41587 438 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 CCR2P41597 374 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 KRT32Q14532 448 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 CCDC6Q16204 474 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 XKR9Q5GH70 373 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 CD300LGQ6UXG3 332 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 DAGLBQ8NCG7 672 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 TCEAL4Q96EI5 215 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 NAP1L4Q99733 375 aaKnown RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 LXNQ9BS40 222 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 DUSP15Q9H1R2 295 aaPredicted RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 FZD8Q9H461 694 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 CYP4F11Q9HBI6 524 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 TMEM9BQ9NQ34 198 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 XPNPEP1Q9NQW7 623 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 ASAH2Q9NR71 780 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 RBM12Q9NTZ6 932 aaKnown RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 ANKEF1Q9NU02 776 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 C2orf42Q9NWW7 574 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 CACNG4Q9UBN1 327 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 DDX25Q9UHL0 483 aaKnown RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 DACH1Q9UI36 760 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 SLC8A2Q9UPR5 921 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 LAMA5O15230 3695 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 ASH1LQ9NR48 2969 aaKnown RBP6.87□□□□□ -1.31
TVP23B-210ENST00000582288 AKAP13Q12802 2813 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SETXQ7Z333 2677 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 GCN1Q92616 2671 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SMG1Q96Q15 3661 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 VWA8A3KMH1 1905 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 PDCD11Q14690 1871 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SLC38A8A6NNN8 435 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SMAPO00193 183 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 GIPC1O14908 333 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 KHNYNO15037 678 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 EXTL3O43909 919 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 RECQL4O94761 1208 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SLITRK3O94933 977 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SEC24AO95486 1093 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 CAPNS1P04632 268 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 IFNAR1P17181 557 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 GLRA2P23416 452 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 TKTP29401 623 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 RDXP35241 583 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 CLCNKBP51801 687 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 NLRP5P59047 1200 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 AMPD2Q01433 879 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 PLD1Q13393 1074 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 NTRK3Q16288 839 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 DCAF4L1Q3SXM0 396 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SOWAHCQ53LP3 525 aaPredicted RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 TMEM196Q5HYL7 178 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 CDCA2Q69YH5 1023 aaPredicted RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 PROSER1Q86XN7 944 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 EXOC4Q96A65 974 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 PPP1R10Q96QC0 940 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 ADPGKQ9BRR6 497 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 C2orf40Q9H1Z8 148 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SLKQ9H2G2 1235 aaPredicted RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SLC32A1Q9H598 525 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 SNTG2Q9NY99 539 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 AFF4Q9UHB7 1163 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 ZMYM5Q9UJ78 669 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
TVP23B-210ENST00000582288 FASNP49327 2511 aaKnown RBP6.86□□□□□ -1.31
TVP23B-210ENST00000582288 ARID2Q68CP9 1835 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 NCANO14594 1321 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 ACKR2O00590 384 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 CDX4O14627 284 aaPredicted RBP6.85□□□□□ -1.31
TVP23B-210ENST00000582288 TRDMT1O14717 391 aaKnown RBP6.85□□□□□ -1.31
TVP23B-210ENST00000582288 AVPP01185 164 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 MYL4P12829 197 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 SPINK2P20155 84 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 RPL9P32969 192 aaKnown RBP6.85□□□□□ -1.31
TVP23B-210ENST00000582288 SOX9P48436 509 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 CREB5Q02930 508 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 GRSF1Q12849 480 aaKnown RBP eCLIP6.85□□□□□ -1.31
TVP23B-210ENST00000582288 LMAN2Q12907 356 aa6.85□□□□□ -1.31
TVP23B-210ENST00000582288 PRPF4BQ13523 1007 aaKnown RBP6.85□□□□□ -1.31
TVP23B-210ENST00000582288 PON2Q15165 354 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms