RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PRKAR2AP13861 404 aaKnown RBP24.18■■□□□ 1.46
CCDC47-204ENST00000582252 COMTP21964 271 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 CTNNA2P26232 953 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 GUCY2DQ02846 1103 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 SEL1L2Q5TEA6 688 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 CAVIN3Q969G5 261 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 LENG1Q96BZ8 264 aaPredicted RBP24.18■■□□□ 1.46
CCDC47-204ENST00000582252 FAXDC2Q96IV6 333 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 EPB41L5Q9HCM4 733 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 MED4Q9NPJ6 270 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 A0A087WZ62 844 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 RRN3P2A6NIE6 340 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 B4GALT5O43286 388 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 RAD51CO43502 376 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 MYBL2P10244 700 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 GRIK4Q16099 956 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 EEF1DP3Q658K8 133 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 ZNF668Q96K58 619 aaPredicted RBP24.17■■□□□ 1.46
CCDC47-204ENST00000582252 FDXACB1Q9BRP7 624 aaPredicted RBP24.17■■□□□ 1.46
CCDC47-204ENST00000582252 PLVAPQ9BX97 442 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 MINDY3Q9H8M7 445 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 WBP1LQ9NX94 342 aa24.17■■□□□ 1.46
CCDC47-204ENST00000582252 THAP12O43422 761 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 TRIM32Q13049 653 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 ZNF699Q32M78 642 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 ZNF410Q86VK4 478 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 GSPT2Q8IYD1 628 aaKnown RBP24.16■■□□□ 1.46
CCDC47-204ENST00000582252 UBR7Q8N806 425 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 SLAIN1Q8ND83 568 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 SCLT1Q96NL6 688 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 AP1M1Q9BXS5 423 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 HPCAL4Q9UM19 191 aa24.16■■□□□ 1.46
CCDC47-204ENST00000582252 FAM170AA1A519 330 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 CST3P01034 146 aaPredicted RBP24.15■■□□□ 1.46
CCDC47-204ENST00000582252 GLI1P08151 1106 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 ZNF132P52740 706 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 MYL6P60660 151 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 CDC42EP1Q00587 391 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 DCAF12L1Q5VU92 463 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 NAA35Q5VZE5 725 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 NLRP7Q8WX94 980 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 MRPL47Q9HD33 250 aaKnown RBP24.15■■□□□ 1.46
CCDC47-204ENST00000582252 SART1O43290 800 aaKnown RBP24.15■■□□□ 1.46
CCDC47-204ENST00000582252 RARBP10826 455 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 CTNNA1P35221 906 aaKnown RBP24.15■■□□□ 1.46
CCDC47-204ENST00000582252 SLC1A1P43005 524 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 AARSP49588 968 aaKnown RBP eCLIP24.15■■□□□ 1.46
CCDC47-204ENST00000582252 CUL1Q13616 776 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 MAP3K21Q5TCX8 1036 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 SND1Q7KZF4 910 aaKnown RBP eCLIP24.15■■□□□ 1.461e-7■■■■■ 29.2
CCDC47-204ENST00000582252 APBB1IPQ7Z5R6 666 aaPredicted RBP24.15■■□□□ 1.46
CCDC47-204ENST00000582252 FAM71BQ8TC56 605 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 ZBTB10Q96DT7 871 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 ASB7Q9H672 318 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 SPC25Q9HBM1 224 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 SCINQ9Y6U3 715 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 UMODL1Q5DID0 1318 aa24.15■■□□□ 1.46
CCDC47-204ENST00000582252 ERLIN2O94905 339 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 GJA9P57773 515 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 NOMO3P69849 1222 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 MRPS25P82663 173 aaKnown RBP24.14■■□□□ 1.45
CCDC47-204ENST00000582252 FSCN1Q16658 493 aaKnown RBP24.14■■□□□ 1.45
CCDC47-204ENST00000582252 AMHR2Q16671 573 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 MON1BQ7L1V2 547 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 PHF13Q86YI8 300 aaPredicted RBP24.14■■□□□ 1.45
CCDC47-204ENST00000582252 EFCAB13Q8IY85 973 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 WHAMMQ8TF30 809 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 CPA5Q8WXQ8 436 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 CD101Q93033 1021 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 CYFIP2Q96F07 1278 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 ADPGKQ9BRR6 497 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 ANAPC7Q9UJX3 599 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 TRIM17Q9Y577 477 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 PCDHA3Q9Y5H8 950 aa24.14■■□□□ 1.45
CCDC47-204ENST00000582252 F2P00734 622 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 VTNP04004 478 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 STAG3L1P0CL83 205 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 OSTNP61366 133 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 C1QBPQ07021 282 aaKnown RBP24.13■■□□□ 1.45
CCDC47-204ENST00000582252 ALG3Q92685 438 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 DDX47Q9H0S4 455 aaKnown RBP24.13■■□□□ 1.45
CCDC47-204ENST00000582252 UPF3AQ9H1J1 476 aaKnown RBP24.13■■□□□ 1.45
CCDC47-204ENST00000582252 PDZD7Q9H5P4 517 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 LSM8O95777 96 aaKnown RBP24.13■■□□□ 1.45
CCDC47-204ENST00000582252 IQCF3P0C7M6 154 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 CXCL8P10145 99 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 RWDD2BP57060 319 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 IFT81Q8WYA0 676 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 CISHQ9NSE2 258 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.13■■□□□ 1.45
CCDC47-204ENST00000582252 ADAM22Q9P0K1 906 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 LCMT1Q9UIC8 334 aa24.13■■□□□ 1.45
CCDC47-204ENST00000582252 MYO1FO00160 1098 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 KPNA6O60684 536 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 CALCAP01258 141 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 C6orf222P0C671 652 aaPredicted RBP24.12■■□□□ 1.45
CCDC47-204ENST00000582252 CCND3P30281 292 aaPredicted RBP24.12■■□□□ 1.45
CCDC47-204ENST00000582252 PEX5P50542 639 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 CEP120Q8N960 986 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 ZNF606Q8WXB4 792 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms