RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 IBSPP21815 317 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 NOMO3P69849 1222 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 NOMO1Q15155 1222 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 INAVAQ3KP66 663 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 NOMO2Q5JPE7 1267 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 SYDE2Q5VT97 1194 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 PGM2L1Q6PCE3 622 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 UBE3BQ7Z3V4 1068 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 Q8NA96 180 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 AUTS2Q8WXX7 1259 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 FBXL20Q96IG2 436 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 MYOCQ99972 504 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 SENP6Q9GZR1 1112 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 LANCL2Q9NS86 450 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 ADAM21Q9UKJ8 722 aa5.95□□□□□ -1.46
SMCHD1-207ENST00000581711 hCG_2014768A0A024R1R8 64 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 LINC01548A6NM66 108 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 PROM1O43490 865 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 ONECUT2O95948 504 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 PER3P56645 1201 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 MRPS9P82933 396 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 SLC10A2Q12908 348 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 KLF9Q13886 244 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 MUM1Q2TAK8 710 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 BRDTQ58F21 947 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 SEM1Q6ZVN7 128 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 C1orf162Q8NEQ5 155 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 NUP133Q8WUM0 1156 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 RAX2Q96IS3 184 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 ASPSCR1Q9BZE9 553 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 LDAHQ9H6V9 325 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 IFT122Q9HBG6 1241 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 DMRT3Q9NQL9 472 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 HOMER2Q9NSB8 354 aa5.94□□□□□ -1.46
SMCHD1-207ENST00000581711 ALG1L2C9J202 215 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA12O60330 932 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 FPR1P21462 350 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 MTNR1BP49286 362 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCBP2Q15366 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 CLUL1Q15846 466 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 ETFDHQ16134 617 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 KLHL22Q53GT1 634 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 HOXB13Q92826 284 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 AJAP1Q9UKB5 411 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA9Q9Y5G4 932 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA8Q9Y5G5 932 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA7Q9Y5G6 932 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA6Q9Y5G7 932 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA3Q9Y5H0 932 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 PCDHGA2Q9Y5H1 932 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 TNKSO95271 1327 aa5.93□□□□□ -1.46
SMCHD1-207ENST00000581711 FZD9O00144 591 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 ALAS1P13196 640 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 RGS19P49795 217 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 TUBA4AP68366 448 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 SLFN5Q08AF3 891 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 GRM1Q13255 1194 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 FAM180AQ6UWF9 173 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 FITM2Q8N6M3 262 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 PPM1NQ8N819 430 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 SEMA6DQ8NFY4 1073 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 STAG1Q8WVM7 1258 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 RPL36ALQ969Q0 106 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 FAXDC2Q96IV6 333 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 ACE2Q9BYF1 805 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 BRINP2Q9C0B6 783 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 SCOCQ9UIL1 159 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 ZNF521Q96K83 1311 aa5.92□□□□□ -1.46
SMCHD1-207ENST00000581711 LINC00473A8K010 186 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 ADM5C9JUS6 153 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 KELP23276 732 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 ANAPC15P60006 121 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 IGBP1P78318 339 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 TFF2Q03403 129 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 ACAP2Q15057 778 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 ADRM1Q16186 407 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 PTPN21Q16825 1174 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 ZNF782Q6ZMW2 699 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 AMOTL1Q8IY63 956 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 CASKIN2Q8WXE0 1202 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 LPIN2Q92539 896 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 TMEM125Q96AQ2 219 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 INTS13Q9NVM9 706 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 MKS1Q9NXB0 559 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 GPR45Q9Y5Y3 372 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 ACTL7AQ9Y615 435 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 CACNA1IQ9P0X4 2223 aa5.91□□□□□ -1.46
SMCHD1-207ENST00000581711 A0A1W2PS29 197 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 CDHR4A6H8M9 788 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 TEX33O43247 280 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 XPOTO43592 962 aaKnown RBP5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 AGXTP21549 392 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 PCSK1P29120 753 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 FHL1Q13642 323 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 ODF1Q14990 250 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 PTPRRQ15256 657 aa5.9□□□□□ -1.46
SMCHD1-207ENST00000581711 TSHZ1Q6ZSZ6 1077 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms