RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 GINS2Q9Y248 185 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 NUB1Q9Y5A7 615 aa8.57□□□□□ -1.04
KPNB1-210ENST00000580573 ANO9A1A5B4 782 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 TNNC2P02585 160 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 TUBB4AP04350 444 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 CTSHP09668 335 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 TMEM191BP0C7N4 346 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 CCDC172P0C7W6 258 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 ATF7P17544 494 aaPredicted RBP8.56□□□□□ -1.04
KPNB1-210ENST00000580573 CYP3A5P20815 502 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 ASPAP45381 313 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 GJA8P48165 433 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 CTCFP49711 727 aaPredicted RBP8.56□□□□□ -1.04
KPNB1-210ENST00000580573 MYL6P60660 151 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 KRT83P78385 493 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 TFAMQ00059 246 aaKnown RBP8.56□□□□□ -1.04
KPNB1-210ENST00000580573 KLHL30Q0D2K2 578 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 BIRC3Q13489 604 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 BMS1Q14692 1282 aaKnown RBP8.56□□□□□ -1.04
KPNB1-210ENST00000580573 GPNMBQ14956 572 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 NAB2Q15742 525 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 ZNF598Q86UK7 904 aaKnown RBP8.56□□□□□ -1.04
KPNB1-210ENST00000580573 LAPTM4BQ86VI4 370 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 PPM1KQ8N3J5 372 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 LRRC52Q8N7C0 313 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 ACRBPQ8NEB7 543 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 GSTCDQ8NEC7 633 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 EPS8L1Q8TE68 723 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 DDX1Q92499 740 aaKnown RBP8.56□□□□□ -1.04
KPNB1-210ENST00000580573 CCDC42Q96M95 316 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 DESI2Q9BSY9 194 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 PI4K2AQ9BTU6 479 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 NIF3L1Q9GZT8 377 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 CXCL16Q9H2A7 254 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 PCDHB2Q9Y5E7 798 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 COL4A6Q14031 1691 aa8.56□□□□□ -1.04
KPNB1-210ENST00000580573 UMODL1Q5DID0 1318 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PTPRDP23468 1912 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PTPRSQ13332 1948 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 A0A087X0T9 212 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 A0A0U1RQF3 1178 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 BTNL10A8MVZ5 291 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 KIF2AO00139 706 aaPredicted RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 TK2O00142 265 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 DDX3XO00571 662 aaKnown RBP eCLIP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PIRO00625 290 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PTGESO14684 152 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 MGEA5O60502 916 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 FAM228BP0C875 321 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PNMA6AP0CW24 399 aaPredicted RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 GHRP10912 638 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 SELPP16109 830 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 LRPAP1P30533 357 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 CD52P31358 61 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 VAV2P52735 878 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 YARSP54577 528 aaKnown RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 FAM189BP81408 668 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 INCA1Q0VD86 236 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PAK2Q13177 524 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 BFSP2Q13515 415 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 TDRD12Q587J7 1177 aaKnown RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 WDR44Q5JSH3 913 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 C10orf76Q5T2E6 689 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 TWF2Q6IBS0 349 aaKnown RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 SPOPLQ6IQ16 392 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 LRRC8DQ7L1W4 858 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 LIMS2Q7Z4I7 341 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 ZNF677Q86XU0 584 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 LNX1Q8TBB1 728 aaPredicted RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 LINC01599Q8WXQ3 324 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PPP1R10Q96QC0 940 aaKnown RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 ARID3AQ99856 593 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 IMPG2Q9BZV3 1241 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 TRIM6Q9C030 488 aaPredicted RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 RGS18Q9NS28 235 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 NAGPAQ9UK23 515 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 INTUQ9ULD6 942 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 UBQLN1Q9UMX0 589 aaKnown RBP8.55□□□□□ -1.04
KPNB1-210ENST00000580573 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 GIT1Q9Y2X7 761 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 HES2Q9Y543 173 aa8.55□□□□□ -1.04
KPNB1-210ENST00000580573 PATJQ8NI35 1801 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 A0A0U1RQJ8 604 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 C9IYK1 514 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 FANCGO15287 622 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 AKR1B10O60218 316 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 PHACTR2O75167 634 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 PARNO95453 639 aaKnown RBP8.54□□□□□ -1.04
KPNB1-210ENST00000580573 CXCL10P02778 98 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 ITGB3P05106 788 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 HSPA1AP0DMV8 641 aaKnown RBP8.54□□□□□ -1.04
KPNB1-210ENST00000580573 HSPA1BP0DMV9 641 aaKnown RBP8.54□□□□□ -1.04
KPNB1-210ENST00000580573 GZMAP12544 262 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 SKIP12755 728 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 CYP11B1P15538 503 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 CHRNB2P17787 502 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 LBX1P52954 281 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 RBP5P82980 135 aa8.54□□□□□ -1.04
KPNB1-210ENST00000580573 GFPT1Q06210 699 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms