RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 ARHGAP29Q52LW3 1261 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 EARS2Q5JPH6 523 aaKnown RBP9.55□□□□□ -0.88
BRIP1-204ENST00000579028 RNF43Q68DV7 783 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 PSAPL1Q6NUJ1 521 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 ALKAL1Q6UXT8 129 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 TMC8Q8IU68 726 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 BEST2Q8NFU1 509 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 ZC3H10Q96K80 434 aaKnown RBP9.55□□□□□ -0.88
BRIP1-204ENST00000579028 SUSD3Q96L08 255 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 LRRC3Q9BY71 257 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 SLITRK6Q9H5Y7 841 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
BRIP1-204ENST00000579028 VPS45Q9NRW7 570 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 SLC38A7Q9NVC3 462 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 EML5Q05BV3 1969 aa9.55□□□□□ -0.88
BRIP1-204ENST00000579028 NUP210Q8TEM1 1887 aaPredicted RBP9.55□□□□□ -0.88
BRIP1-204ENST00000579028 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 SPATA31C1P0DKV0 1188 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 CCDC192P0DO97 292 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 XBP1P17861 261 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 GRM5P41594 1212 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 NOVA1P51513 510 aaKnown RBP9.54□□□□□ -0.88
BRIP1-204ENST00000579028 PON2Q15165 354 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 PPP2R5AQ15172 486 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 CALCRLQ16602 461 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 ATF7IP2Q5U623 682 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 ZNF280DQ6N043 979 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 APBB1IPQ7Z5R6 666 aaPredicted RBP9.54□□□□□ -0.88
BRIP1-204ENST00000579028 ARID3BQ8IVW6 561 aaPredicted RBP9.54□□□□□ -0.88
BRIP1-204ENST00000579028 DEPTORQ8TB45 409 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 LRRC3BQ96PB8 259 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 MKNK1Q9BUB5 465 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 EDEM2Q9BV94 578 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 SMOC1Q9H4F8 434 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 TUFT1Q9NNX1 390 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 TOPORSQ9NS56 1045 aaPredicted RBP9.54□□□□□ -0.88
BRIP1-204ENST00000579028 GJB4Q9NTQ9 266 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 OBP2AQ9NY56 170 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 GTSE1Q9NYZ3 720 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 TNFSF13BQ9Y275 285 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 YIPF1Q9Y548 306 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 STK36Q9NRP7 1315 aa9.54□□□□□ -0.88
BRIP1-204ENST00000579028 CNOT1A5YKK6 2376 aaKnown RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 KIF26AQ9ULI4 1882 aaPredicted RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 FAM208BQ5VWN6 2430 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 CHD8Q9HCK8 2581 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 A0A1W2PRU2 124 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 KCNE1P15382 129 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 LIG1P18858 919 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 CYP11B2P19099 503 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 RPL9P32969 192 aaKnown RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 PXNP49023 591 aaPredicted RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 EFNA5P52803 228 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 YARSP54577 528 aaKnown RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 ZNF252P-AS1Q0IIN9 211 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 PLD1Q13393 1074 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 PLK5Q496M5 336 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 RNF19BQ6ZMZ0 732 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 HAUS6Q7Z4H7 955 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 CEP120Q8N960 986 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 APPL2Q8NEU8 664 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 GATA6Q92908 595 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 ZFYVE19Q96K21 471 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 CCDC94Q9BW85 323 aaPredicted RBP9.53□□□□□ -0.88
BRIP1-204ENST00000579028 DNAJC25Q9H1X3 360 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 CDT1Q9H211 546 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 NUB1Q9Y5A7 615 aa9.53□□□□□ -0.88
BRIP1-204ENST00000579028 SRRM3A6NNA2 597 aaPredicted RBP9.52□□□□□ -0.89
BRIP1-204ENST00000579028 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 DPYSL4O14531 572 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 GIPC1O14908 333 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 ATG13O75143 517 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 CDKL5O76039 1030 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 VNN2O95498 520 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 CPB1P15086 417 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TXKP42681 527 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 FOXC1Q12948 553 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 STK3Q13188 491 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 NR5A1Q13285 461 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TMEM196Q5HYL7 178 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 STXBP5Q5T5C0 1151 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 DAB2IPQ5VWQ8 1189 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TCEAL6Q6IPX3 200 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 CATSPER3Q86XQ3 398 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 CAMKK1Q8N5S9 505 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TTC8Q8TAM2 541 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 DDX12PQ92771 950 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms