RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 GDE1Q9NZC3 331 aa13.12□□□□□ -0.31
PRPF8-215ENST00000576958 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
PRPF8-215ENST00000576958 KIF26AQ9ULI4 1882 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 A0A1W2PRU2 124 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 ARNTLO00327 626 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 NFICP08651 508 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 GJB2P29033 226 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 RPL9P32969 192 aaKnown RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 PRPHP41219 470 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 WNT7BP56706 349 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 DUSP4Q13115 394 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 MCM6Q14566 821 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 RSPO4Q2I0M5 234 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 ZNF280DQ6N043 979 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 Q6ZS52 159 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 ATAD1Q8NBU5 361 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 ZSCAN18Q8TBC5 510 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 SPIRE2Q8WWL2 714 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 RUBCNQ92622 972 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 NELL1Q92832 810 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 LPIN3Q9BQK8 851 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 MKNK1Q9BUB5 465 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 PRMT8Q9NR22 394 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 SH2B1Q9NRF2 756 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-215ENST00000576958 BLOC1S4Q9NUP1 217 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 SCN1AP35498 2009 aa13.11□□□□□ -0.31
PRPF8-215ENST00000576958 SLC38A8A6NNN8 435 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 HEPACAM2A8MVW5 462 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 H7C4K7 107 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 M0QZQ0 153 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 KINO60870 393 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 TGM1P22735 817 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 CCNE1P24864 410 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 PFKPQ01813 784 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 SATB1Q01826 763 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 STRN3Q13033 797 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 CCDC142Q17RM4 750 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 ZC2HC1CQ53FD0 456 aaPredicted RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 JADE1Q6IE81 842 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 USP49Q70CQ1 688 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 GPBP1Q86WP2 473 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 ZBTB44Q8NCP5 570 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 BICD1Q96G01 975 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 TMX3Q96JJ7 454 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 ZFP14Q9HCL3 533 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 AFF4Q9UHB7 1163 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 SMG5Q9UPR3 1016 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
PRPF8-215ENST00000576958 PIAS3Q9Y6X2 628 aa13.1□□□□□ -0.31
PRPF8-215ENST00000576958 MTMR11A4FU01 709 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 K7ENM7 598 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 CLDN3O15551 220 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 LILRB5O75023 590 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 PRAMEF12O95522 483 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 LRPAP1P30533 357 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRPF8-215ENST00000576958 EPHA5P54756 1037 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 CYP4F8P98187 520 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
PRPF8-215ENST00000576958 ZPBP2Q6X784 338 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
PRPF8-215ENST00000576958 SMARCD2Q92925 531 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 ZNF512Q96ME7 567 aaPredicted RBP13.09□□□□□ -0.31
PRPF8-215ENST00000576958 OSBPL6Q9BZF3 934 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
PRPF8-215ENST00000576958 OAZ2O95190 189 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 CLTAP09496 248 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 PSMC3P17980 439 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 PLCG1P19174 1290 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 GPR15P49685 360 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 ACOT2P49753 483 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
PRPF8-215ENST00000576958 TNK2Q07912 1038 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 ZNF528Q3MIS6 628 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 CYP4A22Q5TCH4 519 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 CENPPQ6IPU0 288 aa13.08□□□□□ -0.32
PRPF8-215ENST00000576958 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms