RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 IFT74Q96LB3 600 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 TBC1D32Q96NH3 1257 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 PGLYRP2Q96PD5 576 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 ACO2Q99798 780 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 POLR3CQ9BUI4 534 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 CCDC94Q9BW85 323 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 GPR88Q9GZN0 384 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 CDT1Q9H211 546 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 CRISPLD1Q9H336 500 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 C8orf33Q9H7E9 229 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 PTPRHQ9HD43 1115 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 TIMM13Q9Y5L4 95 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 PDCD11Q14690 1871 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 CCDC169A6NNP5 214 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 KCNK5O95279 499 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 HOXB3P14651 431 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 CPB1P15086 417 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 MARCKSP29966 332 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 CTHP32929 405 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 RPL9P32969 192 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 MCM4P33991 863 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 MCM7P33993 719 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 EFNA5P52803 228 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 LIMK1P53667 647 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 SHC2P98077 582 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 TNK2Q07912 1038 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 DUSP4Q13115 394 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 COL9A2Q14055 689 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 PPP2R5AQ15172 486 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 SEZ6Q53EL9 994 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 ZNF280DQ6N043 979 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 PKN3Q6P5Z2 889 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 KBTBD6Q86V97 674 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 TMC8Q8IU68 726 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 LEMD2Q8NC56 503 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 WASF1Q92558 559 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 E2F7Q96AV8 911 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 ZBTB45Q96K62 511 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 SUSD3Q96L08 255 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 ACAP3Q96P50 834 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 TCHPQ9BT92 498 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 MKNK1Q9BUB5 465 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 TARS2Q9BW92 718 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 TOPORSQ9NS56 1045 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 SLC38A7Q9NVC3 462 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 POLR3BQ9NW08 1133 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 SLC27A5Q9Y2P5 690 aa11.07□□□□□ -0.64
NPLOC4-220ENST00000576940 WDFY3Q8IZQ1 3526 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 ATG2BQ96BY7 2078 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 C1QTNF9BB2RNN3 333 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 PROS1P07225 676 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 C1QTNF9P0C862 333 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 KCNE1P15382 129 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 RPA1P27694 616 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 HOXA6P31267 233 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 PEX3P56589 373 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 SPAG1Q07617 926 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 CCINQ13939 588 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 ZNF568Q3ZCX4 644 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 C1orf228Q6PIY5 440 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 CACNA2D4Q7Z3S7 1137 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 RALGPS2Q86X27 583 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 DIS3L2Q8IYB7 885 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 APPL2Q8NEU8 664 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 FAM200AQ8TCP9 573 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 GAB3Q8WWW8 586 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 MSANTD3Q96H12 275 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 LSM14BQ9BX40 385 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 BHMT2Q9H2M3 363 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 ATXN3LQ9H3M9 355 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 YIPF1Q9Y548 306 aa11.06□□□□□ -0.64
NPLOC4-220ENST00000576940 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 DPYSL4O14531 572 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 ABLIM1O14639 778 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 RPP40O75818 363 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 SOAT2O75908 522 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 EPN2O95208 641 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 CCDC192P0DO97 292 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 HARSP12081 509 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 CDR1P51861 262 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 ZNF174Q15697 407 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 SLC10A6Q3KNW5 377 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 ARHGAP29Q52LW3 1261 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 GAREM2Q75VX8 874 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 TAS1R3Q7RTX0 852 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 APBB1IPQ7Z5R6 666 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 DNAJB7Q7Z6W7 309 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 BEST2Q8NFU1 509 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 LOXL4Q96JB6 756 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 CNTN3Q9P232 1028 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 TUBGCP4Q9UGJ1 667 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms