RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ASB3Q9Y575 518 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 CNOT1A5YKK6 2376 aaKnown RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 SLC38A8A6NNN8 435 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 TM4SF5O14894 197 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 AXIN1O15169 862 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 MED24O75448 989 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 RPP40O75818 363 aaKnown RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 OAZ2O95190 189 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 EPN2O95208 641 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 IGFBP6P24592 240 aaPredicted RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 WEE1P30291 646 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 CTHP32929 405 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 MCM4P33991 863 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ALDH1A3P47895 512 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 SOX4Q06945 474 aaPredicted RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 SRSF5Q13243 272 aaKnown RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 ORC2Q13416 577 aaPredicted RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 CCINQ13939 588 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ZNF568Q3ZCX4 644 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ARHGAP15Q53QZ3 475 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 STPG1Q5TH74 334 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ARID3BQ8IVW6 561 aaPredicted RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 SHKBP1Q8TBC3 707 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 GAB3Q8WWW8 586 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 DDX12PQ92771 950 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 EXOC4Q96A65 974 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ACO2Q99798 780 aaKnown RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 TCHPQ9BT92 498 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 KIFC3Q9BVG8 833 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ARRDC1-AS1Q9H2J1 176 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 PTPRHQ9HD43 1115 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 VPS45Q9NRW7 570 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 RBM12Q9NTZ6 932 aaKnown RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 CNTN3Q9P232 1028 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 ZMYM5Q9UJ78 669 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 USP20Q9Y2K6 914 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 STK24Q9Y6E0 443 aa9.84□□□□□ -0.83
SMG6-218ENST00000575454 MYH9P35579 1960 aaKnown RBP9.84□□□□□ -0.83
SMG6-218ENST00000575454 F5P12259 2224 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 A0A1W2PRU2 124 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 OR6C75A6NL08 312 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 BTBD18B2RXH4 712 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 EDN1P05305 212 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 CCDC192P0DO97 292 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 GJA1P17302 382 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 RAP1GAPP47736 663 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 AMPD2Q01433 879 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 YWHAHQ04917 246 aaPredicted RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 GRSF1Q12849 480 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMG6-218ENST00000575454 DMP1Q13316 513 aaPredicted RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 SAFBQ15424 915 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMG6-218ENST00000575454 SF3A2Q15428 464 aaKnown RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 Q6ZS52 159 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 USP37Q86T82 979 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 ITIH5Q86UX2 942 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 DIS3L2Q8IYB7 885 aaKnown RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 CAMKK1Q8N5S9 505 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 BEST2Q8NFU1 509 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 ZMAT2Q96NC0 199 aaKnown RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 TBC1D32Q96NH3 1257 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 LSM14BQ9BX40 385 aaKnown RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 CDT1Q9H211 546 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 C17orf75Q9HAS0 396 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 SH2B1Q9NRF2 756 aaPredicted RBP9.83□□□□□ -0.84
SMG6-218ENST00000575454 SLC8A2Q9UPR5 921 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 YIPF1Q9Y548 306 aa9.83□□□□□ -0.84
SMG6-218ENST00000575454 BPTFQ12830 3046 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 CCDC169A6NNP5 214 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 M0QZQ0 153 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 KCNK5O95279 499 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 PAX3P23760 479 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 MCM7P33993 719 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 NPTX2P47972 431 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 SOX9P48436 509 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 OSTNP61366 133 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 GPR17Q13304 367 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 PON2Q15165 354 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 ITPRIPL2Q3MIP1 535 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 ARMCX5Q6P1M9 558 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 TXNDC11Q6PKC3 985 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 MPZL3Q6UWV2 235 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 SKAP1Q86WV1 359 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 TMC8Q8IU68 726 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 CEP120Q8N960 986 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 PSMG2Q969U7 264 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 ZC3H10Q96K80 434 aaKnown RBP9.82□□□□□ -0.84
SMG6-218ENST00000575454 DRC1Q96MC2 740 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 GCNAQ96QF7 691 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 TMEM209Q96SK2 561 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 LRRC3Q9BY71 257 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 TMEM60Q9H2L4 133 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 BHMT2Q9H2M3 363 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 PLEKHA5Q9HAU0 1116 aa9.82□□□□□ -0.84
SMG6-218ENST00000575454 HSFX1Q9UBD0 423 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms