RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ALDH1A3P47895 512 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 EPHB3P54753 998 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 EPHA5P54756 1037 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 SCRN1Q12765 414 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 TRIM29Q14134 588 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 PON2Q15165 354 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 PTPAQ15257 358 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 CCDC6Q16204 474 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 TTC8Q8TAM2 541 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 SHKBP1Q8TBC3 707 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 KIFAP3Q92845 792 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 KIFC3Q9BVG8 833 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 SLC8A2Q9UPR5 921 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 YIPF1Q9Y548 306 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 NUP205Q92621 2012 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
CTNS-208ENST00000574218 CCDC169A6NNP5 214 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 ARNTLO00327 626 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 NRG2O14511 850 aaPredicted RBP13.05□□□□□ -0.32
CTNS-208ENST00000574218 ATG13O75143 517 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 MOSPD3O75425 235 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 MED24O75448 989 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 KCNK5O95279 499 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 FGF19O95750 216 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 EDN1P05305 212 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
CTNS-208ENST00000574218 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
CTNS-208ENST00000574218 USP37Q86T82 979 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 DDX12PQ92771 950 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 GCNAQ96QF7 691 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
CTNS-208ENST00000574218 MRPL4Q9BYD3 311 aaKnown RBP13.05□□□□□ -0.32
CTNS-208ENST00000574218 CDT1Q9H211 546 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 TPCN1Q9ULQ1 816 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 TNFSF13BQ9Y275 285 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 PCDHGA5Q9Y5G8 931 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 TCHHQ07283 1943 aa13.05□□□□□ -0.32
CTNS-208ENST00000574218 ANK1P16157 1881 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 DENND4CQ5VZ89 1909 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 SPATA31C1P0DKV0 1188 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 HARSP12081 509 aaKnown RBP13.04□□□□□ -0.32
CTNS-208ENST00000574218 KCNE1P15382 129 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 MPLP40238 635 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 YWHAHQ04917 246 aaPredicted RBP13.04□□□□□ -0.32
CTNS-208ENST00000574218 COL9A2Q14055 689 aaPredicted RBP13.04□□□□□ -0.32
CTNS-208ENST00000574218 HAUS3Q68CZ6 603 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 PSAPL1Q6NUJ1 521 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 TXNDC11Q6PKC3 985 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 ARID3BQ8IVW6 561 aaPredicted RBP13.04□□□□□ -0.32
CTNS-208ENST00000574218 CEP120Q8N960 986 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 MTMR9Q96QG7 549 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 OXCT2Q9BYC2 517 aaPredicted RBP13.04□□□□□ -0.32
CTNS-208ENST00000574218 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 THG1LQ9NWX6 298 aaKnown RBP13.04□□□□□ -0.32
CTNS-208ENST00000574218 GTSE1Q9NYZ3 720 aa13.04□□□□□ -0.32
CTNS-208ENST00000574218 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
CTNS-208ENST00000574218 PFKFB2O60825 505 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 AKAP3O75969 853 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 MCF2P10911 925 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 RPA1P27694 616 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 MCM7P33993 719 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
CTNS-208ENST00000574218 GRSF1Q12849 480 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTNS-208ENST00000574218 ELF2Q15723 593 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 GPR158Q5T848 1215 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 ITIH5Q86UX2 942 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 GPIHBP1Q8IV16 184 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 DIS3L2Q8IYB7 885 aaKnown RBP13.03□□□□□ -0.32
CTNS-208ENST00000574218 BPIFB1Q8TDL5 484 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 EXOC4Q96A65 974 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 ACO2Q99798 780 aaKnown RBP13.03□□□□□ -0.32
CTNS-208ENST00000574218 LSM14BQ9BX40 385 aaKnown RBP13.03□□□□□ -0.32
CTNS-208ENST00000574218 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 ASB3Q9Y575 518 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 NCANO14594 1321 aa13.03□□□□□ -0.32
CTNS-208ENST00000574218 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
CTNS-208ENST00000574218 TM4SF5O14894 197 aa13.02□□□□□ -0.33
CTNS-208ENST00000574218 RHOBTB1O94844 696 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms