RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 SMYD3Q9H7B4 428 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 CTTNBP2NLQ9P2B4 639 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 NOC2LQ9Y3T9 749 aaKnown RBP12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 UNGP13051 313 aaPredicted RBP12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 ZSCAN20P17040 1043 aaPredicted RBP12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 AXLP30530 894 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 MAP2K2P36507 400 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 GPC5P78333 572 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 C2CD6Q53TS8 623 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 UBXN11Q5T124 520 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 SERINC5Q86VE9 423 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 SDCBP2Q9H190 292 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
TOM1L1-213ENST00000572405 M0QZ92 97 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 PRLRP16471 622 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 YARSP54577 528 aaKnown RBP12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 CDH8P55286 799 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 SLFN11Q7Z7L1 901 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 RHOT2Q8IXI1 618 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 MS4A14Q96JA4 679 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 TUBGCP4Q9UGJ1 667 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 KIF4AO95239 1232 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 YY1P25490 414 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 ORC1Q13415 861 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 PEX26Q7Z412 305 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 TAF4BQ92750 862 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 HPDLQ96IR7 371 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 ZSWIM1Q9BR11 485 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
TOM1L1-213ENST00000572405 PPEF2O14830 753 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CHRNA1P02708 482 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 INHAP05111 366 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 NOMO3P69849 1222 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 C2orf54Q08AI8 447 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 RPS6KA1Q15418 735 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 LLGL2Q6P1M3 1020 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 FBXO38Q6PIJ6 1188 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 PHLDB2Q86SQ0 1253 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 NT5DC3Q86UY8 548 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CD302Q8IX05 232 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 SYCE1Q8N0S2 351 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 ZNF606Q8WXB4 792 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 GTF3C4Q9UKN8 822 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 SCN1AP35498 2009 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 KCNK3O14649 394 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CYP1A2P05177 515 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CENPCQ03188 943 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 PTGISQ16647 500 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 NT5DC4Q86YG4 428 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 PCSK9Q8NBP7 692 aaKnown RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 ZNF564Q8TBZ8 553 aaPredicted RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 TFAP2BQ92481 460 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 BTBD6Q96KE9 485 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 OSBPL7Q9BZF2 842 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 TRMT13Q9NUP7 481 aaKnown RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CNTN3Q9P232 1028 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 CNOT8Q9UFF9 292 aaKnown RBP12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 PARP2Q9UGN5 583 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 STXBP5LQ9Y2K9 1186 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 IPPQ9Y573 584 aa12.83□□□□□ -0.36
TOM1L1-213ENST00000572405 RHOXF2BP0C7M4 288 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 ATICP31939 592 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 THPOP40225 353 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 RBP5P82980 135 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 NFX1Q12986 1120 aaKnown RBP12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 CCDC181Q5TID7 509 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 ALKAL1Q6UXT8 129 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 RNF180Q86T96 592 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 MCOLN2Q8IZK6 566 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 SMG8Q8ND04 991 aaKnown RBP12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
TOM1L1-213ENST00000572405 TWNKQ96RR1 684 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms