RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 SRPRBQ9Y5M8 271 aaKnown RBP13.09□□□□□ -0.31
VPS9D1-207ENST00000568691 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
VPS9D1-207ENST00000568691 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 ZBTB39O15060 712 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 RPP40O75818 363 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 SEC24AO95486 1093 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 GJA1P17302 382 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 LIG1P18858 919 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 MBTD1Q05BQ5 628 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 TUSC3Q13454 348 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 PLK5Q496M5 336 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 FSIP1Q8NA03 581 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 ETNPPLQ8TBG4 499 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 CCDC51Q96ER9 411 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 ZC3H10Q96K80 434 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 NAP1L4Q99733 375 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 CORO1BQ9BR76 489 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 TRPV4Q9HBA0 871 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 SNTG2Q9NY99 539 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 PCDHB6Q9Y5E3 794 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 PCDHGA5Q9Y5G8 931 aa13.08□□□□□ -0.32
VPS9D1-207ENST00000568691 EML5Q05BV3 1969 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 LNP1A1A4G5 178 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 MYBPHLA2RUH7 354 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 HYAL3O43820 417 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 MICAL2O94851 1124 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 NPTXRO95502 500 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 TDP2O95551 362 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 PTPN2P17706 415 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 AXLP30530 894 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 PRPHP41219 470 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 PSMC5P62195 406 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 EARS2Q5JPH6 523 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 TIGD1Q96MW7 591 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 DUSP15Q9H1R2 295 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 FBXO2Q9UK22 296 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 KLK13Q9UKR3 277 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 HPSEQ9Y251 543 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 ADAMTS20P59510 1910 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
VPS9D1-207ENST00000568691 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 HEPACAM2A8MVW5 462 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 ZNF263O14978 683 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 ERLIN2O94905 339 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 ABLIM3O94929 683 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 TKTP29401 623 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 CTHP32929 405 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 LRRC32Q14392 662 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 Q4G0T1 1027 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 C19orf48Q6RUI8 117 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 C3orf58Q8NDZ4 430 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 TTC8Q8TAM2 541 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 ASAP3Q8TDY4 903 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 DEPDC1BQ8WUY9 529 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 CHFRQ96EP1 664 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 CEP170P1Q96L14 293 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 CEP72Q9P209 647 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 BACE2Q9Y5Z0 518 aa13.06□□□□□ -0.32
VPS9D1-207ENST00000568691 A0A1B0GUA9 196 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 SYCE3A1L190 88 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 I3L4J1 428 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 DCLK1O15075 740 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 CEACAM1P13688 526 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 CSRP1P21291 193 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 ROR1Q01973 937 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 CAPSQ13938 189 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 EMC2Q15006 297 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 PON2Q15165 354 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 PDZD3Q86UT5 571 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 GPIHBP1Q8IV16 184 aa13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 ZSCAN18Q8TBC5 510 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-207ENST00000568691 SLC7A3Q8WY07 619 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms