RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 POP1Q99575 1024 aaKnown RBP17.83■□□□□ 0.44
CMTM3-213ENST00000566756 TACO1Q9BSH4 297 aaKnown RBP17.83■□□□□ 0.44
CMTM3-213ENST00000566756 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.44
CMTM3-213ENST00000566756 DCLK3Q9C098 648 aa17.83■□□□□ 0.44
CMTM3-213ENST00000566756 EXTL3O43909 919 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 ATG7O95352 703 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 TTC4O95801 387 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 KCTD2Q14681 263 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 PSMD6Q15008 389 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 SMYD5Q6GMV2 418 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 ABHD15Q6UXT9 468 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 ANKRD23Q86SG2 305 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 LRRC34Q8IZ02 419 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 CEP170P1Q96L14 293 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 SH2D3AQ9BRG2 576 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 TOPORSQ9NS56 1045 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-213ENST00000566756 ARHGAP28Q9P2N2 729 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 ASIC3Q9UHC3 531 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 PROSCO94903 275 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 ACTR2P61160 394 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 KLF1Q13351 362 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-213ENST00000566756 CCNG2Q16589 344 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 CYB5D1Q6P9G0 228 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 PRMT1Q99873 361 aaKnown RBP17.82■□□□□ 0.44
CMTM3-213ENST00000566756 JPH2Q9BR39 696 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-213ENST00000566756 SLC12A4Q9UP95 1085 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 NEU2Q9Y3R4 380 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 STYXL1Q9Y6J8 313 aa17.82■□□□□ 0.44
CMTM3-213ENST00000566756 FAM170AA1A519 330 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 SMIM23A6NLE4 172 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 HNRNPDLO14979 420 aaKnown RBP17.81■□□□□ 0.44
CMTM3-213ENST00000566756 SP2Q02086 613 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 FSTL1Q12841 308 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 SPRED3Q2MJR0 410 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 ZACNQ401N2 412 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 WDR44Q5JSH3 913 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 LIN9Q5TKA1 542 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 MIS18BP1Q6P0N0 1132 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 MON1BQ7L1V2 547 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 CCDC91Q7Z6B0 441 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 RPAINQ86UA6 219 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 C1orf54Q8WWF1 131 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 IFT74Q96LB3 600 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 MMP19Q99542 508 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 PLCD4Q9BRC7 762 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 KIFC3Q9BVG8 833 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 MRPL47Q9HD33 250 aaKnown RBP17.81■□□□□ 0.44
CMTM3-213ENST00000566756 LGALS13Q9UHV8 139 aa17.81■□□□□ 0.44
CMTM3-213ENST00000566756 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 PDHXO00330 501 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CELF2O95319 508 aaKnown RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 OAS1P00973 400 aaKnown RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 ATF2P15336 505 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 NSFP46459 744 aaKnown RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CCL15Q16663 113 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 UBAP2Q5T6F2 1119 aaKnown RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CCDC25Q86WR0 208 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 PARP9Q8IXQ6 854 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 KATNAL2Q8IYT4 538 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CCDC89Q8N998 374 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 IPO4Q8TEX9 1081 aaKnown RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 ARHGEF2Q92974 986 aaKnown RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 GABBR1Q9UBS5 961 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 ACTL7BQ9Y614 415 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 BTBD19C9JJ37 291 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 ZNF862O60290 1169 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CYP2C8P10632 490 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 RRM1P23921 792 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 GCLCP48506 637 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CCNA1P78396 465 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 SNCBQ16143 134 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 SPRYD7Q5W111 196 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 RHOT1Q8IXI2 618 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 GPRC5AQ8NFJ5 357 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 FGD4Q96M96 766 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CNTN6Q9UQ52 1028 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 ADGRA3Q8IWK6 1321 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 PLXNA1Q9UIW2 1896 aa17.8■□□□□ 0.44
CMTM3-213ENST00000566756 CFAP73A6NFT4 308 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SNX3O60493 162 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 PIGRP01833 764 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 C4BPAP04003 597 aaKnown RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 VIMP08670 466 aaKnown RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SLCO1A2P46721 670 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 ITGA8P53708 1063 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 LMNB2Q03252 620 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 MKRN3Q13064 507 aaKnown RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 NEDD9Q14511 834 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SWSAP1Q6NVH7 229 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 SEPT14Q6ZU15 432 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 TRPM8Q7Z2W7 1104 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 PHF13Q86YI8 300 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 RIBC1Q8N443 379 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-213ENST00000566756 EXD1Q8NHP7 514 aa17.79■□□□□ 0.44
CMTM3-213ENST00000566756 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms