RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MRPL42Q9Y6G3 142 aaKnown RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 TANC1Q9C0D5 1861 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 ITIH6Q6UXX5 1313 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 GRXCR1A8MXD5 290 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 NT5C1B-RDH14C9J2C7 533 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 CYB561D2O14569 222 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 PPEF2O14830 753 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 AP5Z1O43299 807 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 FAM163BP0C2L3 166 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 ODC1P11926 461 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 UCHL3P15374 230 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 RABGGTBP53611 331 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 MFAP3P55082 362 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 GCNT1Q02742 428 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 KRT17Q04695 432 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 CUL2Q13617 745 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
CDH1-208ENST00000565810 TSR1Q2NL82 804 aaKnown RBP8.35□□□□□ -1.07
CDH1-208ENST00000565810 SPOPLQ6IQ16 392 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 RRAGAQ7L523 313 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 DPH6Q7L8W6 267 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 TMC6Q7Z403 805 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.35□□□□□ -1.07
CDH1-208ENST00000565810 FMNL3Q8IVF7 1028 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 VSTM4Q8IW00 320 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 TOP6BLQ8N6T0 577 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 COLGALT1Q8NBJ5 622 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 APPL2Q8NEU8 664 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 LMO3Q8TAP4 145 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 CXorf38Q8TB03 319 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SP7Q8TDD2 431 aaPredicted RBP8.35□□□□□ -1.07
CDH1-208ENST00000565810 HASPINQ8TF76 798 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 RABGGTAQ92696 567 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 TATDN2Q93075 761 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SENP8Q96LD8 212 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SAMD11Q96NU1 681 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SPAG5Q96R06 1193 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 PAAF1Q9BRP4 392 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 NIF3L1Q9GZT8 377 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 XYLT2Q9H1B5 865 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 APOBEC3GQ9HC16 384 aaKnown RBP8.35□□□□□ -1.07
CDH1-208ENST00000565810 GDAP2Q9NXN4 497 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SPG21Q9NZD8 308 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 CACNG4Q9UBN1 327 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 PUF60Q9UHX1 559 aaKnown RBP8.35□□□□□ -1.07
CDH1-208ENST00000565810 FBXL5Q9UKA1 691 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 DNAJC12Q9UKB3 198 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 ADAM28Q9UKQ2 775 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 DSEQ9UL01 958 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SIK3Q9Y2K2 1263 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 TET1Q8NFU7 2136 aa8.35□□□□□ -1.07
CDH1-208ENST00000565810 SF3B1O75533 1304 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH1-208ENST00000565810 SYN3O14994 580 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SPTLC1O15269 473 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 B4GALT3O60512 393 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 KIF4AO95239 1232 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 RB1P06400 928 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 CDC25BP30305 580 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 CTNNB1P35222 781 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 BMPR1AP36894 532 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 PBX1P40424 430 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 PBX3P40426 434 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 BRCC3P46736 316 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 LHX1P48742 406 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 AARSP49588 968 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH1-208ENST00000565810 KLK7P49862 253 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 POLR2FP61218 127 aaKnown RBP8.34□□□□□ -1.07
CDH1-208ENST00000565810 RAPGEF1Q13905 1077 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 PTPN21Q16825 1174 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 ARHGAP44Q17R89 818 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 FIGNQ5HY92 759 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SMYD5Q6GMV2 418 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 KIAA1841Q6NSI8 718 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 FUT10Q6P4F1 479 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SCARA5Q6ZMJ2 495 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 THEM5Q8N1Q8 247 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SLC39A11Q8N1S5 342 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 TMEM86AQ8N2M4 240 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 TMEM130Q8N3G9 435 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SPATA18Q8TC71 538 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 CPLX3Q8WVH0 158 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
CDH1-208ENST00000565810 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 IGSF21Q96ID5 467 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 SUSD3Q96L08 255 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 TGS1Q96RS0 853 aaKnown RBP8.34□□□□□ -1.07
CDH1-208ENST00000565810 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 NUCKS1Q9H1E3 243 aaKnown RBP8.34□□□□□ -1.07
CDH1-208ENST00000565810 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 FAM124BQ9H5Z6 455 aaPredicted RBP8.34□□□□□ -1.07
CDH1-208ENST00000565810 MARCH5Q9NX47 278 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 CEP72Q9P209 647 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 HCSTQ9UBK5 93 aa8.34□□□□□ -1.07
CDH1-208ENST00000565810 PCDHB8Q9UN66 801 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms