RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 JAK2O60674 1132 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 ATG13O75143 517 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 RECQL4O94761 1208 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 PRKCBP05771 671 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 FDPSP14324 419 aaKnown RBP17.49■□□□□ 0.39
RNF40-205ENST00000563909 CLCNKBP51801 687 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 CD300LGQ6UXG3 332 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 C4orf19Q8IY42 314 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 CAMKK1Q8N5S9 505 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 SHKBP1Q8TBC3 707 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 LXNQ9BS40 222 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 NFKBIZQ9BYH8 718 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 VAV3Q9UKW4 847 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.49■□□□□ 0.39
RNF40-205ENST00000563909 TBX3O15119 743 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 BRCC3P46736 316 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 EPHA5P54756 1037 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 TWF1Q12792 350 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 PPP2R5CQ13362 524 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 CUL4AQ13619 759 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 COL28A1Q2UY09 1125 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 HAUS6Q7Z4H7 955 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 FAM184AQ8NB25 1140 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 LRRC3BQ96PB8 259 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 POLR3BQ9NW08 1133 aaPredicted RBP17.48■□□□□ 0.39
RNF40-205ENST00000563909 RGL1Q9NZL6 768 aa17.48■□□□□ 0.39
RNF40-205ENST00000563909 EIF4E1BA6NMX2 242 aaKnown RBP17.47■□□□□ 0.39
RNF40-205ENST00000563909 ARL2P36404 184 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 TNK2Q07912 1038 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 MOXD1Q6UVY6 613 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 ARID3BQ8IVW6 561 aaPredicted RBP17.47■□□□□ 0.39
RNF40-205ENST00000563909 HHIPQ96QV1 700 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
RNF40-205ENST00000563909 KIF3AQ9Y496 699 aa17.47■□□□□ 0.39
RNF40-205ENST00000563909 SPAARA0A1B0GVQ0 90 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 PATE3B3GLJ2 98 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 M0R2N6 131 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 DTNBO60941 627 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 CAPNS1P04632 268 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 GLRA2P23416 452 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 GBP1P32455 592 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 TRIM29Q14134 588 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 UPP1Q16831 310 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 TPGS2Q68CL5 300 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 NOSTRINQ8IVI9 506 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 BLIDQ8IZY5 108 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 C3orf58Q8NDZ4 430 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 AIFM3Q96NN9 605 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 BBC3Q96PG8 261 aaPredicted RBP17.46■□□□□ 0.39
RNF40-205ENST00000563909 MKNK1Q9BUB5 465 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 SLC32A1Q9H598 525 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
RNF40-205ENST00000563909 A0A1W2PRU2 124 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 DPYSL4O14531 572 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 SLC37A4O43826 429 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 IRX4P78413 519 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 SIM1P81133 766 aaPredicted RBP17.45■□□□□ 0.38
RNF40-205ENST00000563909 CTTNQ14247 550 aaKnown RBP17.45■□□□□ 0.38
RNF40-205ENST00000563909 KARSQ15046 597 aaKnown RBP17.45■□□□□ 0.38
RNF40-205ENST00000563909 TMEM132AQ24JP5 1023 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 INTS4Q96HW7 963 aaKnown RBP17.45■□□□□ 0.38
RNF40-205ENST00000563909 DYDC2Q96IM9 177 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 UROC1Q96N76 676 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 PDZD7Q9H5P4 517 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 ZSWIM4Q9H7M6 989 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 GOLGA2P5Q9HBQ8 144 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 FBXL5Q9UKA1 691 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 EML5Q05BV3 1969 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 KALRNO60229 2985 aa17.45■□□□□ 0.38
RNF40-205ENST00000563909 CELSR3Q9NYQ7 3312 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 TTLL13PA6NNM8 815 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 H7C4K7 107 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 GRSF1Q12849 480 aaKnown RBP eCLIP17.44■□□□□ 0.38
RNF40-205ENST00000563909 EPHA7Q15375 998 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 INF2Q27J81 1249 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 ITPRIPL2Q3MIP1 535 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 STXBP5Q5T5C0 1151 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 FSTL4Q6MZW2 842 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 TPH2Q8IWU9 490 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 PPP1R10Q96QC0 940 aaKnown RBP17.44■□□□□ 0.38
RNF40-205ENST00000563909 PRMT7Q9NVM4 692 aaPredicted RBP17.44■□□□□ 0.38
RNF40-205ENST00000563909 INVSQ9Y283 1065 aa17.44■□□□□ 0.38
RNF40-205ENST00000563909 TENM4Q6N022 2769 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 N4BP3O15049 544 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 MEFVO15553 781 aaPredicted RBP17.43■□□□□ 0.38
RNF40-205ENST00000563909 GJB2P29033 226 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 TMEM196Q5HYL7 178 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 CHCHD4Q8N4Q1 142 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 DAGLBQ8NCG7 672 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms