RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TCTN1Q2MV58 587 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 CCDC144BQ3MJ40 725 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 KIAA1755Q5JYT7 1200 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 BORAQ6PGQ7 559 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 TEPPQ6URK8 271 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 STK32CQ86UX6 486 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 CCDC146Q8IYE0 955 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 DCLK2Q8N568 766 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 MSL3Q8N5Y2 521 aaKnown RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 TMEM145Q8NBT3 493 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 MICAL1Q8TDZ2 1067 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.6□□□□□ -1.67
HERC1-211ENST00000560983 CHAMP1Q96JM3 812 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 LCORQ96JN0 433 aaPredicted RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 MSLNLQ96KJ4 702 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 SEZ6LQ9BYH1 1024 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 KATNBL1Q9H079 304 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 EPN3Q9H201 632 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 ALDH8A1Q9H2A2 487 aaPredicted RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 IFT57Q9NWB7 429 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 DENND2AQ9ULE3 1009 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 MROH7-TTC4A0A0A0MT08 1334 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 DOCK1Q14185 1865 aa4.6□□□□□ -1.67
HERC1-211ENST00000560983 MAP1BP46821 2468 aaKnown RBP4.6□□□□□ -1.67
HERC1-211ENST00000560983 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 A0A1W2PRG0 241 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 DDX3XO00571 662 aaKnown RBP eCLIP4.59□□□□□ -1.67
HERC1-211ENST00000560983 LINC01565O15544 149 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 SLC25A27O95847 323 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 FGRP09769 529 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 GUCY1A2P33402 732 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 GTF2F1P35269 517 aaKnown RBP eCLIP4.59□□□□□ -1.67
HERC1-211ENST00000560983 ECI1P42126 302 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 PHKA1P46020 1223 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 MAP4K2Q12851 820 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 ADAM15Q13444 863 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 PLS1Q14651 629 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 CDSNQ15517 529 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 SURF1Q15526 300 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 RABL6Q3YEC7 729 aaPredicted RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 EPC2Q52LR7 807 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 TATDN1Q6P1N9 297 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 FAM124AQ86V42 546 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 PROSER1Q86XN7 944 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 DZIP1Q86YF9 867 aaKnown RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 PPIL6Q8IXY8 311 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 MB21D1Q8N884 522 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 DNERQ8NFT8 737 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 PHOSPHO1Q8TCT1 267 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 SH3RF3Q8TEJ3 882 aaPredicted RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 ZCCHC14Q8WYQ9 949 aaKnown RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 TOE1Q96GM8 510 aaKnown RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 SUCLG2Q96I99 432 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 C8orf49Q96NF6 230 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 CHMP4AQ9BY43 222 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 FTOQ9C0B1 505 aaKnown RBP eCLIP4.59□□□□□ -1.67
HERC1-211ENST00000560983 SIL1Q9H173 461 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 DHX36Q9H2U1 1008 aaKnown RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 SPC25Q9HBM1 224 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 PPP4R1LQ9P1A2 415 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 ZHX1Q9UKY1 873 aaPredicted RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 ADAMTS5Q9UNA0 930 aa4.59□□□□□ -1.67
HERC1-211ENST00000560983 COA3Q9Y2R0 106 aaPredicted RBP4.59□□□□□ -1.67
HERC1-211ENST00000560983 KMT2EQ8IZD2 1858 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 GBF1Q92538 1859 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 ASH1LQ9NR48 2969 aaKnown RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 PI15O43692 258 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 NBPF7P0C2Y1 421 aaPredicted RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 SUPT20HL2P0C7V6 817 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 ETFBP38117 255 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 MLLT6P55198 1093 aaPredicted RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 RRP1P56182 461 aaKnown RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 GNAI1P63096 354 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 HTRA4P83105 476 aaPredicted RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 GPM6BQ13491 265 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 FSCN1Q16658 493 aaKnown RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 PTPN21Q16825 1174 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 SLC10A6Q3KNW5 377 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 SV2CQ496J9 727 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 TMEM63BQ5T3F8 832 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 STEAP3Q658P3 488 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 ATG9AQ7Z3C6 839 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 TEX11Q8IYF3 940 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 ZGPATQ8N5A5 531 aaKnown RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 ANKRD44Q8N8A2 993 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 KCNG4Q8TDN1 519 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 DVL3Q92997 716 aaPredicted RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 PPP1R14AQ96A00 147 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 NSUN4Q96CB9 384 aaKnown RBP4.58□□□□□ -1.68
HERC1-211ENST00000560983 FEZ1Q99689 392 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 STK31Q9BXU1 1019 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 SEMA4AQ9H3S1 761 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 EPB41L1Q9H4G0 881 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 CAPN10Q9HC96 672 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 CD248Q9HCU0 757 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 ABCF2Q9UG63 623 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 CD207Q9UJ71 328 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 PCDHB4Q9Y5E5 795 aa4.58□□□□□ -1.68
HERC1-211ENST00000560983 MRVI1Q9Y6F6 885 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms