RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 RPP40O75818 363 aaKnown RBP19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 PROS1P07225 676 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 EPHB3P54753 998 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 FCHO2Q0JRZ9 810 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 ARHGAP29Q52LW3 1261 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 TTC8Q8TAM2 541 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 SHKBP1Q8TBC3 707 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 GAB3Q8WWW8 586 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 SUSD3Q96L08 255 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 ACAP3Q96P50 834 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 MTMR9Q96QG7 549 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 TCHPQ9BT92 498 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 POLR3CQ9BUI4 534 aaPredicted RBP19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 NCANO14594 1321 aa19.5■□□□□ 0.71
TSPAN3-208ENST00000560514 TM4SF5O14894 197 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 EPN2O95208 641 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 XKR4Q5GH76 650 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 RNF19BQ6ZMZ0 732 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 ARID3BQ8IVW6 561 aaPredicted RBP19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 CEP120Q8N960 986 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 DDX12PQ92771 950 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 TNFRSF25Q93038 417 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 CDT1Q9H211 546 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 GTSE1Q9NYZ3 720 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 YIPF1Q9Y548 306 aa19.49■□□□□ 0.71
TSPAN3-208ENST00000560514 CCDC169A6NNP5 214 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 KCNK5O95279 499 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 ALDH1A3P47895 512 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 YWHAHQ04917 246 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 TRIM29Q14134 588 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 PTPAQ15257 358 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 TXNDC11Q6PKC3 985 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 ALKAL1Q6UXT8 129 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 GPIHBP1Q8IV16 184 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 TBC1D32Q96NH3 1257 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 LSM14BQ9BX40 385 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 C2orf42Q9NWW7 574 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 PCDHB8Q9UN66 801 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 SLC8A2Q9UPR5 921 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 PCDHGA5Q9Y5G8 931 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 BAHCC1Q9P281 2608 aa19.48■□□□□ 0.71
TSPAN3-208ENST00000560514 PFKFB2O60825 505 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 DTNBO60941 627 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 KCNE1P15382 129 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 RPA1P27694 616 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 COL9A2Q14055 689 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 ARHGAP15Q53QZ3 475 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 RNF43Q68DV7 783 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 PSAPL1Q6NUJ1 521 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 KBTBD6Q86V97 674 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 RSPRY1Q96DX4 576 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 ZFYVE19Q96K21 471 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 PGLYRP2Q96PD5 576 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 ACO2Q99798 780 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 OXCT2Q9BYC2 517 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 MRPL4Q9BYD3 311 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 ATXN3LQ9H3M9 355 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 POLD4Q9HCU8 107 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 RXFP3Q9NSD7 469 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 TPCN1Q9ULQ1 816 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 PHLPP2Q6ZVD8 1323 aa19.47■□□□□ 0.71
TSPAN3-208ENST00000560514 CCDC163A0A0D9SF12 145 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 BTBD18B2RXH4 712 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 ATG13O75143 517 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 FGF19O95750 216 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 MCM7P33993 719 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 RAP1GAPP47736 663 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 PXNP49023 591 aaPredicted RBP19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 CCINQ13939 588 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 HAUS3Q68CZ6 603 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 USP37Q86T82 979 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 C18orf25Q96B23 403 aaPredicted RBP19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 TMEM60Q9H2L4 133 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 VPS45Q9NRW7 570 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 THG1LQ9NWX6 298 aaKnown RBP19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 OBP2AQ9NY56 170 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 CNTN3Q9P232 1028 aa19.46■□□□□ 0.71
TSPAN3-208ENST00000560514 NUP210Q8TEM1 1887 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 KIF26AQ9ULI4 1882 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 EXTL3O43909 919 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 MCF2P10911 925 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 HARSP12081 509 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 MPLP40238 635 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 WDR44Q5JSH3 913 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 GPR158Q5T848 1215 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 UNQ6494/PRO21346Q6UXR6 183 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 DIS3L2Q8IYB7 885 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 BPIFB1Q8TDL5 484 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 ASB3Q9Y575 518 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 ATRXP46100 2492 aa19.45■□□□□ 0.7
TSPAN3-208ENST00000560514 WNT7AO00755 349 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 AKAP3O75969 853 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 MUTP22033 750 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 NOVA1P51513 510 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 PEX3P56589 373 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 GRSF1Q12849 480 aaKnown RBP eCLIP19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 DUSP4Q13115 394 aa19.44■□□□□ 0.7
TSPAN3-208ENST00000560514 DMP1Q13316 513 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms