RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KREMEN2Q8NCW0 462 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 C3orf58Q8NDZ4 430 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 CMASQ8NFW8 434 aaPredicted RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 ZNF507Q8TCN5 953 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 SMG7Q92540 1137 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 HPS3Q969F9 1004 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ANKRD36BP1Q96IX9 119 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ZNF560Q96MR9 790 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 CLSTN3Q9BQT9 956 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 CBWD1Q9BRT8 395 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 RHOBTB2Q9BYZ6 727 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 GTPBP4Q9BZE4 634 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 PRKD2Q9BZL6 878 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 PCIF1Q9H4Z3 704 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 GDPD2Q9HCC8 539 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 AGPAT3Q9NRZ7 376 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 RMND1Q9NWS8 449 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 DPP3Q9NY33 737 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNX1-205ENST00000559339 TUBGCP4Q9UGJ1 667 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ITGA11Q9UKX5 1188 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 POLIQ9UNA4 740 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 HPSEQ9Y251 543 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 FRMD4BQ9Y2L6 1034 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 REV3LO60673 3130 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 FAM237AA0A1B0GTK4 181 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 GOLGA8IPA6NC78 632 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 OR6C75A6NL08 312 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 GOLGA8JA6NMD2 632 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 KPNA7A9QM74 516 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 LOC730098B7Z3J9 87 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 I3L4J1 428 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 M0QZQ0 153 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 ACTN4O43707 911 aaKnown RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 CALUO43852 315 aaPredicted RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 EXOC3O60645 756 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 HUS1O60921 280 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 RFPL2O75678 378 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 CLSTN1O94985 981 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 OAZ2O95190 189 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SMC2O95347 1197 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 LRG1P02750 347 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 RPN1P04843 607 aaKnown RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 WEE2P0C1S8 567 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 DLATP10515 647 aaKnown RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 TYMPP19971 482 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 RPL13P26373 211 aaKnown RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 CASP1P29466 404 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 GBP2P32456 591 aaPredicted RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 AARSP49588 968 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNX1-205ENST00000559339 AP3M2P53677 418 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 RBP5P82980 135 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 FAM160A1Q05DH4 1040 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 EHHADHQ08426 723 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 ADCY1Q08828 1119 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SMARCB1Q12824 385 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 MTMR3Q13615 1198 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SNRNP35Q16560 246 aaKnown RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 BMT2Q1RMZ1 405 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SV2CQ496J9 727 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 KMT5BQ4FZB7 885 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 TMEM31Q5JXX7 168 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 TPGS2Q68CL5 300 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 LILRA6Q6PI73 481 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 CRELD2Q6UXH1 353 aaPredicted RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 KRBA2Q6ZNG9 492 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 EPM2AIP1Q7L775 607 aaPredicted RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 RNF135Q8IUD6 432 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 BRSK2Q8IWQ3 736 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 NELFCDQ8IXH7 590 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 GRAMD1CQ8IYS0 662 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 CSGALNACT2Q8N6G5 542 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 LRRC52Q8N7C0 313 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 RDH13Q8NBN7 331 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SLC7A14Q8TBB6 771 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SCFD1Q8WVM8 642 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 SENP8Q96LD8 212 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 FGFBP2Q9BYJ0 223 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 POMKQ9H5K3 350 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 CYP4F11Q9HBI6 524 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 PDE11AQ9HCR9 933 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 WDR6Q9NNW5 1121 aaKnown RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 HSPBP1Q9NZL4 362 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 MUTYHQ9UIF7 546 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 FBXL5Q9UKA1 691 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 FBXW11Q9UKB1 542 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 ZFP37Q9Y6Q3 630 aaPredicted RBP4.72□□□□□ -1.65
SNX1-205ENST00000559339 CLUHO75153 1309 aa4.72□□□□□ -1.65
SNX1-205ENST00000559339 PLXNA4Q9HCM2 1894 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ANO9A1A5B4 782 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 WDR27A2RRH5 827 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 C2CD4DB7Z1M9 353 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 PIRO00625 290 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 PDXKO00764 312 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CYB561D2O14569 222 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 ZNF197O14709 1029 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CLIC2O15247 247 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 CCL16O15467 120 aa4.71□□□□□ -1.66
SNX1-205ENST00000559339 MEFVO15553 781 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms