RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 CCDC140Q96MF4 163 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 YME1L1Q96TA2 773 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 GPR20Q99678 358 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 LGR4Q9BXB1 951 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 C1QTNF1Q9BXJ1 281 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 PSTPIP2Q9H939 334 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 LMCD1Q9NZU5 365 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 ZNF215Q9UL58 517 aaPredicted RBP8.53□□□□□ -1.04
PSMA4-208ENST00000558639 TELO2Q9Y4R8 837 aa8.53□□□□□ -1.04
PSMA4-208ENST00000558639 LAMA4Q16363 1823 aa8.52□□□□□ -1.04
PSMA4-208ENST00000558639 SHISA3A0PJX4 238 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 PRODHO43272 600 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 ATP9AO75110 1047 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 PLEKHA8P1O95397 391 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 ASMTLO95671 621 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 FGFR1P11362 822 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 IBSPP21815 317 aaPredicted RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 KCNA5P22460 613 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 MARK3P27448 753 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 MCM5P33992 734 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 TCF7P36402 384 aaPredicted RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 NOP2P46087 812 aaKnown RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 CLCN7P51798 805 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 ANTXR2P58335 489 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 IGBP1P78318 339 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 GPM6BQ13491 265 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 NKAPLQ5M9Q1 402 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 GTF2IRD2BQ6EKJ0 949 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 SYNE3Q6ZMZ3 975 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 GTF2IRD2Q86UP8 949 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 MB21D2Q8IYB1 491 aaPredicted RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 SRBD1Q8N5C6 995 aaKnown RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 GIMAP8Q8ND71 665 aaPredicted RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 BTN2A2Q8WVV5 523 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 SEPT1Q8WYJ6 367 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 GLG1Q92896 1179 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 TOP1MTQ969P6 601 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 LZTS2Q9BRK4 669 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 DHRS4Q9BTZ2 278 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 LRRC2Q9BYS8 371 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 ST14Q9Y5Y6 855 aa8.52□□□□□ -1.05
PSMA4-208ENST00000558639 PRRC2BQ5JSZ5 2229 aaKnown RBP8.52□□□□□ -1.05
PSMA4-208ENST00000558639 TRBV23-1A0A0A0MS06 115 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 SSU72P8A0A1W2PR75 194 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 MEIS2O14770 477 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 TBX1O43435 398 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 CSPG5O95196 566 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 PROCP04070 461 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 SRFP11831 508 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 PABPC1P11940 636 aaKnown RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 SMARCA1P28370 1054 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 HOXC12P31275 282 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 L1CAMP32004 1257 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 UBE2SQ16763 222 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 PTPROQ16827 1216 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 NKPD1Q17RQ9 610 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 EPC2Q52LR7 807 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 ZNF662Q6ZS27 426 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 HEATR3Q7Z4Q2 680 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 THAP5Q7Z6K1 395 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 RSPH3Q86UC2 560 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 TSPYL5Q86VY4 417 aaPredicted RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 NETO1Q8TDF5 533 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 HSPA12BQ96MM6 686 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 INPP4AQ96PE3 977 aaPredicted RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 IER2Q9BTL4 223 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 HDAC8Q9BY41 377 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 IFIH1Q9BYX4 1025 aaKnown RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 LSG1Q9H089 658 aaKnown RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 LY9Q9HBG7 655 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 NAP1L2Q9ULW6 460 aaPredicted RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 PCDHA6Q9UN73 950 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 GPR55Q9Y2T6 319 aaPredicted RBP8.51□□□□□ -1.05
PSMA4-208ENST00000558639 PCDHA8Q9Y5H6 950 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 NRCAMQ92823 1304 aa8.51□□□□□ -1.05
PSMA4-208ENST00000558639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.5□□□□□ -1.05
PSMA4-208ENST00000558639 GSTTP1A0A1W2PQM5 241 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 H0Y8X5 98 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 H3BS24 57 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 DYRK3O43781 588 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 CHRNA1P02708 482 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 CALM1P0DP23 149 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 CALM2P0DP24 149 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 CALM3P0DP25 149 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 GHRP10912 638 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
PSMA4-208ENST00000558639 GRIA2P42262 883 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 SUMO1P63165 101 aaKnown RBP8.5□□□□□ -1.05
PSMA4-208ENST00000558639 PPFIA1Q13136 1202 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 MTMR1Q13613 665 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 DPY19L1Q2PZI1 675 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 FAM209AQ5JX71 171 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 RNF187Q5TA31 235 aaPredicted RBP8.5□□□□□ -1.05
PSMA4-208ENST00000558639 FOXB2Q5VYV0 432 aa8.5□□□□□ -1.05
PSMA4-208ENST00000558639 CREB3L3Q68CJ9 461 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms