RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 AGMOQ6ZNB7 445 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 PPFIBP1Q86W92 1011 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 TMEM173Q86WV6 379 aaPredicted RBP6.91□□□□□ -1.3
IDH3A-204ENST00000558016 TDRD5Q8NAT2 981 aaKnown RBP6.91□□□□□ -1.3
IDH3A-204ENST00000558016 HASPINQ8TF76 798 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 CALML4Q96GE6 196 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 TBC1D32Q96NH3 1257 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 TMEM175Q9BSA9 504 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 TCHPQ9BT92 498 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 COLEC11Q9BWP8 271 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 NT5C3AQ9H0P0 336 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 ZBP1Q9H171 429 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 ZHX3Q9H4I2 956 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 EPHX3Q9H6B9 360 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 NRDE2Q9H7Z3 1164 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 KMT5AQ9NQR1 393 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 MUTYHQ9UIF7 546 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 SSX2IPQ9Y2D8 614 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 GIT1Q9Y2X7 761 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 HCFC2Q9Y5Z7 792 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 BRWD1Q9NSI6 2320 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 PHLPP2Q6ZVD8 1323 aa6.91□□□□□ -1.3
IDH3A-204ENST00000558016 FNDC1Q4ZHG4 1894 aaPredicted RBP6.91□□□□□ -1.3
IDH3A-204ENST00000558016 PLXNA4Q9HCM2 1894 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 C2orf71A6NGG8 1288 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CASTOR2A6NHX0 329 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 NRP1O14786 923 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 HIP1RO75146 1068 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 TADA2AO75478 443 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 RECQL4O94761 1208 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 BMP15O95972 392 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 GLUD1P00367 558 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 GALTP07902 379 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 MYBP10242 640 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CTSAP10619 480 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 HOXB8P17481 243 aaPredicted RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CYP11B2P19099 503 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 MUTP22033 750 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 U2AF2P26368 475 aaKnown RBP eCLIP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 LTBRP36941 435 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 PRPHP41219 470 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 UBA7P41226 1012 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 MTHFRP42898 656 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 IDH3AP50213 366 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 PEX3P56589 373 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CREMQ03060 361 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 COASYQ13057 564 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 COL19A1Q14993 1142 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 PTPN14Q15678 1187 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 UBXN11Q5T124 520 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 ATF7IP2Q5U623 682 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CDCA2Q69YH5 1023 aaPredicted RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 BRAPQ7Z569 592 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 DDX53Q86TM3 631 aaKnown RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 ZNF280BQ86YH2 543 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 GLYCTKQ8IVS8 523 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 SUGP1Q8IWZ8 645 aaKnown RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 MRPL43Q8N983 215 aaKnown RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 VN1R2Q8NFZ6 395 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 NECTIN4Q96NY8 510 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 KIF2CQ99661 725 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 HERC2P3Q9BVR0 1158 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CCDC94Q9BW85 323 aaPredicted RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 PHF7Q9BWX1 381 aaPredicted RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 MRPL4Q9BYD3 311 aaKnown RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 NFKBIZQ9BYH8 718 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 PDZD7Q9H5P4 517 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 SFXN1Q9H9B4 322 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 POLD4Q9HCU8 107 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 TOPORSQ9NS56 1045 aaPredicted RBP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 CLEC1BQ9P126 229 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 DPP7Q9UHL4 492 aa6.9□□□□□ -1.3
IDH3A-204ENST00000558016 SF3B1O75533 1304 aaKnown RBP eCLIP6.9□□□□□ -1.3
IDH3A-204ENST00000558016 MUC3AQ02505 3323 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 NCOR1O75376 2440 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 E9PMD0 336 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 K7ENM7 598 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 K7ERI5 159 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 DDHD2O94830 711 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 FAM13AO94988 1023 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 EYA4O95677 639 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 SOD2P04179 222 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 WEE2P0C1S8 567 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 EPCAMP16422 314 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 EPB42P16452 691 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 ITGB7P26010 798 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
IDH3A-204ENST00000558016 WEE1P30291 646 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 CDC25AP30304 524 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 HOXA11P31270 313 aaPredicted RBP6.89□□□□□ -1.31
IDH3A-204ENST00000558016 OSTNP61366 133 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 ATP2C1P98194 919 aaPredicted RBP6.89□□□□□ -1.31
IDH3A-204ENST00000558016 ITIH3Q06033 890 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 POU5F1BQ06416 359 aa6.89□□□□□ -1.31
IDH3A-204ENST00000558016 TUSC3Q13454 348 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms