RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR1D2P34982 312 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-209ENST00000557342 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
SLIRP-209ENST00000557342 CBX2Q14781 532 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-209ENST00000557342 PSMD6Q15008 389 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 SV2CQ496J9 727 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 ATAT1Q5SQI0 421 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 SLC8B1Q6J4K2 584 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 ZNF280DQ6N043 979 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 USP37Q86T82 979 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 ADHFE1Q8IWW8 467 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 KREMEN2Q8NCW0 462 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 FNBP1Q96RU3 617 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 APOL5Q9BWW9 433 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 DSEQ9UL01 958 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
SLIRP-209ENST00000557342 PPEF2O14830 753 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 OAZ2O95190 189 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 ITGB3P05106 788 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 WNT7BP56706 349 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 RBP5P82980 135 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 CYP24A1Q07973 514 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 NFIL3Q16649 462 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 DUOXA2Q1HG44 320 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 ZNF658Q5TYW1 1059 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-209ENST00000557342 RTL10Q7L3V2 364 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 GPR149Q86SP6 731 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 TMEM130Q8N3G9 435 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 CSGALNACT2Q8N6G5 542 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 C12orf76Q8N812 135 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-209ENST00000557342 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 SPATA20Q8TB22 786 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 MFSD14AQ96MC6 490 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 NECAB3Q96P71 396 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-209ENST00000557342 PHF7Q9BWX1 381 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-209ENST00000557342 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 MTMR12Q9C0I1 747 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 FRMD4BQ9Y2L6 1034 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
SLIRP-209ENST00000557342 SPTBN5Q9NRC6 3674 aaKnown RBP13.47□□□□□ -0.25
SLIRP-209ENST00000557342 CCDC195A0A1B0GUA6 201 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 TNFRSF10AO00220 468 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 ADAM12O43184 909 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 NR3C1P04150 777 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 KRT19P08727 400 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 SPATA31D3P0C874 917 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 DLATP10515 647 aaKnown RBP13.47□□□□□ -0.25
SLIRP-209ENST00000557342 TNNI1P19237 187 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
SLIRP-209ENST00000557342 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
SLIRP-209ENST00000557342 ZP2Q05996 745 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 OVOS1Q6IE37 1185 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 TMC5Q6UXY8 1006 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 SPATA31D4Q6ZUB0 917 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 CGRRF1Q99675 332 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 AGAP1Q9UPQ3 857 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 MAPK8IP1Q9UQF2 711 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 A0A0C4DFX4 3053 aa13.47□□□□□ -0.25
SLIRP-209ENST00000557342 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 OR6C75A6NL08 312 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 CYB561D2O14569 222 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 MAPK13O15264 365 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 SPTLC1O15269 473 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 ZMYND10O75800 440 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 PAPLNO95428 1278 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 CYP11A1P05108 521 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
SLIRP-209ENST00000557342 HOXA9P31269 272 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 ELF1P32519 619 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 SSTR3P32745 418 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-209ENST00000557342 PPP1R2P41236 205 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 AP3M2P53677 418 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 ROR1Q01973 937 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
SLIRP-209ENST00000557342 RSPO2Q6UXX9 243 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms