RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 KIFC3Q9BVG8 833 aa13.78□□□□□ -0.2
PSEN1-221ENST00000557293 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
PSEN1-221ENST00000557293 CRISPLD1Q9H336 500 aa13.78□□□□□ -0.2
PSEN1-221ENST00000557293 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
PSEN1-221ENST00000557293 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
PSEN1-221ENST00000557293 TNFSF13BQ9Y275 285 aa13.78□□□□□ -0.2
PSEN1-221ENST00000557293 CCDC163A0A0D9SF12 145 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 ZZEF1O43149 2961 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 CTDNEP1O95476 244 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 TOP3BO95985 862 aaKnown RBP13.77□□□□□ -0.21
PSEN1-221ENST00000557293 GRM5P41594 1212 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 SCRN1Q12765 414 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 CALCRLQ16602 461 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 TMEM132AQ24JP5 1023 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 TCEAL6Q6IPX3 200 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 GAREM2Q75VX8 874 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 SYNPOQ8N3V7 929 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 TCEAL3Q969E4 200 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 C18orf25Q96B23 403 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-221ENST00000557293 CHFRQ96EP1 664 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 TMEM60Q9H2L4 133 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 ASAH2Q9NR71 780 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 POLR3BQ9NW08 1133 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-221ENST00000557293 ZFYVE26Q68DK2 2539 aa13.77□□□□□ -0.21
PSEN1-221ENST00000557293 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 A0A1W2PRU2 124 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 ABLIM1O14639 778 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 RPP40O75818 363 aaKnown RBP13.76□□□□□ -0.21
PSEN1-221ENST00000557293 FDPSP14324 419 aaKnown RBP13.76□□□□□ -0.21
PSEN1-221ENST00000557293 KCNE1P15382 129 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 SPINK2P20155 84 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 TNK2Q07912 1038 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 PSAPL1Q6NUJ1 521 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 YAF2Q8IY57 180 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 ELMOD1Q8N336 334 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 DDX12PQ92771 950 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
PSEN1-221ENST00000557293 CDT1Q9H211 546 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 PCDHGA5Q9Y5G8 931 aa13.76□□□□□ -0.21
PSEN1-221ENST00000557293 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 EML5Q05BV3 1969 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 MPLP40238 635 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 OSTNP61366 133 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 PLK5Q496M5 336 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 ARHGAP29Q52LW3 1261 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 TAS1R3Q7RTX0 852 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 DEPTORQ8TB45 409 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 TBC1D32Q96NH3 1257 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 ACO2Q99798 780 aaKnown RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 TUFT1Q9NNX1 390 aa13.75□□□□□ -0.21
PSEN1-221ENST00000557293 DAXXQ9UER7 740 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 FASNP49327 2511 aaKnown RBP13.75□□□□□ -0.21
PSEN1-221ENST00000557293 OAZ2O95190 189 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 EFNA5P52803 228 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 ACAP1Q15027 740 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 ECM1Q16610 540 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 RNF43Q68DV7 783 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 ZNF280DQ6N043 979 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 GATA6Q92908 595 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 TM6SF1Q9BZW5 370 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
PSEN1-221ENST00000557293 VPS45Q9NRW7 570 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 SLC38A7Q9NVC3 462 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 OBP2AQ9NY56 170 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 CNTN3Q9P232 1028 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
PSEN1-221ENST00000557293 OTOL1A6NHN0 477 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-221ENST00000557293 SRRM3A6NNA2 597 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-221ENST00000557293 C4orf47A7E2U8 309 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 BTBD18B2RXH4 712 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 K7ERI5 159 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 AKAP3O75969 853 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 PRAMEF12O95522 483 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 PROZP22891 400 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 WEE1P30291 646 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 DUSP4Q13115 394 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 TMEM196Q5HYL7 178 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 CCDC94Q9BW85 323 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-221ENST00000557293 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 TIMM13Q9Y5L4 95 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-221ENST00000557293 KIF26AQ9ULI4 1882 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-221ENST00000557293 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
PSEN1-221ENST00000557293 SPEGQ15772 3267 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 M0QZQ0 153 aa13.72□□□□□ -0.21
PSEN1-221ENST00000557293 TRDMT1O14717 391 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms