RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-208	ENST00000556956	ANXA1	P04083	346 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CYP1A1	P04798	512 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CHGB	P05060	677 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	GNAT1	P11488	350 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	LCP1	P13796	627 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	PRLR	P16471	622 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	XBP1	P17861	261 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CASP14	P31944	242 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	GRIA2	P42262	883 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	PAFAH1B1	P43034	410 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	COPB1	P53618	953 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	EPHB4	P54760	987 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ITGA1	P56199	1179 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	GPR85	P60893	370 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ITIH3	Q06033	890 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	DPT	Q07507	201 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	AIMP1	Q12904	312 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	RASGRF1	Q13972	1273 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MTF1	Q14872	753 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CRYM	Q14894	314 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	TTF1	Q15361	905 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SKIDA1	Q1XH10	827 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MTERF2	Q49AM1	385 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	PREPL	Q4J6C6	727 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	GLE1	Q53GS7	698 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	RILPL1	Q5EBL4	403 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SPDYA	Q5MJ70	313 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	LCE1E	Q5T753	118 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	RNF187	Q5TA31	235 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SLC9C2	Q5TAH2	1124 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CYB5RL	Q6IPT4	315 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	DENND5A	Q6IQ26	1287 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	STYK1	Q6J9G0	422 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	EMB	Q6PCB8	327 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	LBX2	Q6XYB7	198 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CHST3	Q7LGC8	479 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MAMDC2	Q7Z304	686 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	LRP10	Q7Z4F1	713 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	KIAA1328	Q86T90	577 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	NLRP10	Q86W26	655 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ZNF761	Q86XN6	746 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	NOSTRIN	Q8IVI9	506 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MB21D2	Q8IYB1	491 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CCDC170	Q8IYT3	715 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	NLGN4X	Q8N0W4	816 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ARFGAP2	Q8N6H7	521 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	NOA1	Q8NC60	698 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	C3orf20	Q8ND61	904 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	C1orf131	Q8NDD1	294 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ACRBP	Q8NEB7	543 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	OR8K1	Q8NGG5	319 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	TTLL11	Q8NHH1	800 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SPATA20	Q8TB22	786 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ADAMTS17	Q8TE56	1095 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	NOC3L	Q8WTT2	800 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CAVIN3	Q969G5	261 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	JAKMIP2	Q96AA8	810 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ZG16B	Q96DA0	208 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	IQCD	Q96DY2	449 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	C1orf159	Q96HA4	380 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	GSDMA	Q96QA5	445 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CDK5RAP1	Q96SZ6	601 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CDC5L	Q99459	802 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SH3GL2	Q99962	352 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SELENOO	Q9BVL4	669 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SPATA9	Q9BWV2	254 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	TEX13A	Q9BXU3	409 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	TMEM168	Q9H0V1	697 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	FOXP1	Q9H334	677 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	PLEKHA4	Q9H4M7	779 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	VEZT	Q9HBM0	779 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	BARX1	Q9HBU1	254 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CD248	Q9HCU0	757 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	IGSF5	Q9NSI5	407 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SAMSN1	Q9NSI8	373 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ABHD10	Q9NUJ1	306 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	RMND1	Q9NWS8	449 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MAGEC2	Q9UBF1	373 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	RNF14	Q9UBS8	474 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	FTSJ1	Q9UET6	329 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	RWDD2A	Q9UIY3	292 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MCM8	Q9UJA3	840 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	FBXO2	Q9UK22	296 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	PLA2G2D	Q9UNK4	145 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	LUC7L2	Q9Y383	392 aa	Known RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	ABCC6	O95255	1503 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	KDM6A	O15550	1401 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MROH7-TTC4	A0A0A0MT08	1334 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	MAST3	O60307	1309 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	STK36	Q9NRP7	1315 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	SYNRG	Q9UMZ2	1314 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	DIP2A	Q14689	1571 aa		3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	3.17	□□□□□ -1.9
SLIRP-208	ENST00000556956	XRN1	Q8IZH2	1706 aa	Known RBP	3.16	□□□□□ -1.9
SLIRP-208	ENST00000556956	CRYBG1	Q9Y4K1	1723 aa		3.16	□□□□□ -1.9
SLIRP-208	ENST00000556956	CPD	O75976	1380 aa		3.16	□□□□□ -1.9
SLIRP-208	ENST00000556956	TMEM94	Q12767	1356 aa		3.16	□□□□□ -1.9
SLIRP-208	ENST00000556956	HEG1	Q9ULI3	1381 aa		3.16	□□□□□ -1.9
SLIRP-208	ENST00000556956		A0A1B0GUA9	196 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms