RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 VTNP04004 478 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 TCF4P15884 667 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 GJC1P36383 396 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 HNRNPH2P55795 449 aaKnown RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PPARDQ03181 441 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PPFIA1Q13136 1202 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ORC1Q13415 861 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 DHX34Q14147 1143 aaKnown RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 TFDP1Q14186 410 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 AMHR2Q16671 573 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 DUOXA2Q1HG44 320 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CEP85LQ5SZL2 805 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PHF13Q86YI8 300 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CD302Q8IX05 232 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 UBLCP1Q8WVY7 318 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 C1orf54Q8WWF1 131 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF606Q8WXB4 792 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 TRIM11Q96F44 468 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 FDXACB1Q9BRP7 624 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 TXLNGYQ9BZA5 131 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 RAB17Q9H0T7 212 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 IFT122Q9HBG6 1241 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 KLHL11Q9NVR0 708 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-211ENST00000556648 ERAP1Q9NZ08 941 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PTPN22Q9Y2R2 807 aa10.79□□□□□ -0.68
TMEM260-211ENST00000556648 PROSCO94903 275 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 SNAI1O95863 264 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-211ENST00000556648 ITGBL1O95965 494 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-211ENST00000556648 GH1P01241 217 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 TMEM191BP0C7N4 346 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 MYBL1P10243 752 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 CHRNA3P32297 505 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 ACTN2P35609 894 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-211ENST00000556648 SLC26A2P50443 739 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF844Q08AG5 666 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 SNX1Q13596 522 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 CYP1B1Q16678 543 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 LIN9Q5TKA1 542 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 LRRC31Q6UY01 552 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 TRIM72Q6ZMU5 477 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.78□□□□□ -0.68
TMEM260-211ENST00000556648 IMPG2Q9BZV3 1241 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 SDCBP2Q9H190 292 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 SIX4Q9UIU6 781 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 USTQ9Y2C2 406 aa10.78□□□□□ -0.68
TMEM260-211ENST00000556648 R3HDM2Q9Y2K5 976 aaKnown RBP10.78□□□□□ -0.68
TMEM260-211ENST00000556648 LACTBL1A8MY62 500 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 MYO1FO00160 1098 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 ADCY6O43306 1168 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 HSPA6P17066 643 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 ATP1A2P50993 1020 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 AP3M2P53677 418 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 ZNF252P-AS1Q0IIN9 211 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 TRPC3Q13507 836 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 LAMC2Q13753 1193 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 PLEKHA7Q6IQ23 1121 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 DENND1BQ6P3S1 775 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 WDTC1Q8N5D0 677 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 PPTC7Q8NI37 304 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 FBXO25Q8TCJ0 367 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 LRRC45Q96CN5 670 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 FMO2Q99518 471 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 FAM118BQ9BPY3 351 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.68
TMEM260-211ENST00000556648 C16orf70Q9BSU1 422 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 EPB41L4BQ9H329 900 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 RABEP2Q9H5N1 569 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 TMBIM4Q9HC24 238 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 VTA1Q9NP79 307 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 CHST7Q9NS84 486 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.68
TMEM260-211ENST00000556648 TJP2Q9UDY2 1190 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 HMGXB4Q9UGU5 601 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 AKT3Q9Y243 479 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 TNFSF13BQ9Y275 285 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 ATP8A1Q9Y2Q0 1164 aa10.77□□□□□ -0.68
TMEM260-211ENST00000556648 SRCAPQ6ZRS2 3230 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 RBM47A0AV96 593 aaKnown RBP10.77□□□□□ -0.69
TMEM260-211ENST00000556648 FSCN2O14926 492 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 B4GALT4O60513 344 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-211ENST00000556648 PPFIA2O75334 1257 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 TNNC2P02585 160 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 KRT19P08727 400 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 CETPP11597 493 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 SMPD1P17405 629 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 FGFR4P22455 802 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 PLTPP55058 493 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 CDH8P55286 799 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms