RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 FDX1P10109 184 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 KRT13P13646 458 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PLS3P13797 630 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 DDX5P17844 614 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PMS2P54278 862 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 NCKAP1LP55160 1127 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 BASP1P80723 227 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 GTF2BQ00403 316 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CETN1Q12798 172 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 BFSP1Q12934 665 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ASIC2Q16515 512 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PPP1R21Q6ZMI0 780 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 DGLUCYQ7Z3D6 616 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 APOBEC3FQ8IUX4 373 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 RNF10Q8N5U6 811 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 FRS2Q8WU20 508 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PSMB7Q99436 277 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ST6GALNAC4Q9H4F1 302 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CASS4Q9NQ75 786 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 A1CFQ9NQ94 594 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PRKAB1Q9Y478 270 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 AFG3L2Q9Y4W6 797 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 GRID2IPA4D2P6 1211 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 AP3B1O00203 1094 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ZBED4O75132 1171 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 EPN2O95208 641 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 NR3C2P08235 984 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 MAPTP10636 758 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ADSSP30520 456 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 POLD2P49005 469 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 OAZ1P54368 228 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 TPD52P55327 224 aaPredicted RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 TUBB4BP68371 445 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 C2orf54Q08AI8 447 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 FSTL1Q12841 308 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PLS1Q14651 629 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PLCB4Q15147 1175 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 GRAMD1BQ3KR37 738 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ARHGEF16Q5VV41 709 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 PHLDB3Q6NSJ2 640 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CATSPERGQ6ZRH7 1159 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 HS2ST1Q7LGA3 356 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 C12orf56Q8IXR9 622 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 BSNDQ8WZ55 320 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 NDEL1Q9GZM8 345 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 CYP39A1Q9NYL5 469 aa5.41□□□□□ -1.54
TMEM260-210ENST00000556422 LARSQ9P2J5 1176 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 MRPS23Q9Y3D9 190 aaKnown RBP5.41□□□□□ -1.54
TMEM260-210ENST00000556422 ADGRA3Q8IWK6 1321 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 CEP350Q5VT06 3117 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 BTNL10A8MVZ5 291 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 WDR64B1ANS9 1081 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 RTCAO00442 366 aaKnown RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 DDX3XO00571 662 aaKnown RBP eCLIP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 PALMO75781 387 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 NFKBIAP25963 317 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 SMTNP53814 917 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 PSMC5P62195 406 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 ROR2Q01974 943 aaKnown RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 PPP3CAQ08209 521 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 ZC3H12BQ5HYM0 836 aaKnown RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 CEP78Q5JTW2 689 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 NOL9Q5SY16 702 aaKnown RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 CATSPER4Q7RTX7 472 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 TRMT1LQ7Z2T5 733 aaKnown RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 RSPH3Q86UC2 560 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF784Q8NCA9 323 aaPredicted RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 SLC30A5Q8TAD4 765 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 LNX1Q8TBB1 728 aaPredicted RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 NOX5Q96PH1 765 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 KIFC3Q9BVG8 833 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 GOLPH3Q9H4A6 298 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 UBN1Q9NPG3 1134 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 AVENQ9NQS1 362 aaPredicted RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 BATF3Q9NR55 127 aa5.4□□□□□ -1.54
TMEM260-210ENST00000556422 PACSIN2Q9UNF0 486 aaPredicted RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 R3HDM2Q9Y2K5 976 aaKnown RBP5.4□□□□□ -1.54
TMEM260-210ENST00000556422 SYNDIG1LA6NDD5 238 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GOLGA8JA6NMD2 632 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 H3BQF6 201 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GOLGA8TH3BQL2 631 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 POTEB2H3BUK9 544 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 IFRD1O00458 451 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 ACSL4O60488 711 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 USP2O75604 605 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 TSPAN9O75954 239 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 CPP00450 1065 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 TCF7P36402 384 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 MNX1P50219 401 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 JAK3P52333 1124 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SOX10P56693 466 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 KRT76Q01546 638 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SP2Q02086 613 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 PAK2Q13177 524 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 MEI1Q5TIA1 1274 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 CWF19L1Q69YN2 538 aaKnown RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 HAUS6Q7Z4H7 955 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms