RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 KPNA7A9QM74 516 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 H3BNC9 293 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 M0QZQ0 153 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 TEX33O43247 280 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 LPXNO60711 386 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
GABRB3-210ENST00000556166 TAF6P49848 677 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 FANCCQ00597 558 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 MYL7Q01449 175 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 KCNMA1Q12791 1236 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 TRPC3Q13507 836 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 PTPN21Q16825 1174 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 FUT10Q6P4F1 479 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 EHBP1Q8NDI1 1231 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 TATDN2Q93075 761 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 SUSD3Q96L08 255 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 RWDD3Q9Y3V2 267 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 RALGAPA2Q2PPJ7 1873 aa12.34□□□□□ -0.43
GABRB3-210ENST00000556166 GOLGA6L3A6NEY3 463 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 LGALS16A8MUM7 142 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 GOLGA6L19H0YKK7 550 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 P4HA2O15460 535 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
GABRB3-210ENST00000556166 SLC9A1P19634 815 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 FGFR3P22607 806 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 PPM1AP35813 382 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 ERVFC1P60507 584 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 GPM6BQ13491 265 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 GRIN2CQ14957 1233 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 SGSM1Q2NKQ1 1148 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 FAM171A1Q5VUB5 890 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 SAMD11Q96NU1 681 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.44
GABRB3-210ENST00000556166 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
GABRB3-210ENST00000556166 CHST7Q9NS84 486 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 GDAP2Q9NXN4 497 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-210ENST00000556166 PDCD11Q14690 1871 aaKnown RBP12.33□□□□□ -0.44
GABRB3-210ENST00000556166 GBF1Q92538 1859 aa12.33□□□□□ -0.44
GABRB3-210ENST00000556166 CYB561D2O14569 222 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 LILRB3O75022 631 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 N4BP1O75113 896 aaKnown RBP12.32□□□□□ -0.44
GABRB3-210ENST00000556166 PON1P27169 355 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 TKTP29401 623 aaKnown RBP12.32□□□□□ -0.44
GABRB3-210ENST00000556166 ATICP31939 592 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 PNPLA4P41247 253 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 KLK7P49862 253 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 KRT17Q04695 432 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 LRMPQ12912 555 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 NR1I3Q14994 352 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 WDR72Q3MJ13 1102 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 RTP2Q5QGT7 225 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 KIAA0319Q5VV43 1072 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 WSCD1Q658N2 575 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 GDPD5Q8WTR4 605 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 POF1BQ8WVV4 589 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 AUTS2Q8WXX7 1259 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 C11orf84Q9BUA3 381 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-210ENST00000556166 SIX2Q9NPC8 291 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 NXF1Q9UBU9 619 aaKnown RBP12.32□□□□□ -0.44
GABRB3-210ENST00000556166 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 LZTS1Q9Y250 596 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
GABRB3-210ENST00000556166 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
GABRB3-210ENST00000556166 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.44
GABRB3-210ENST00000556166 SCN1AP35498 2009 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
GABRB3-210ENST00000556166 PES1O00541 588 aaKnown RBP12.31□□□□□ -0.44
GABRB3-210ENST00000556166 SOD2P04179 222 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 IRS1P35568 1242 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 ASPAP45381 313 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 CDH8P55286 799 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
GABRB3-210ENST00000556166 MYO1EQ12965 1108 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 MRPL58Q14197 206 aaKnown RBP12.31□□□□□ -0.44
GABRB3-210ENST00000556166 ZNF699Q32M78 642 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 SV2CQ496J9 727 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 PHLDB3Q6NSJ2 640 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 GJB7Q6PEY0 223 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-210ENST00000556166 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 TAF4BQ92750 862 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 ARID3AQ99856 593 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
GABRB3-210ENST00000556166 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms