RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 BEST2Q8NFU1 509 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 ARNTL2Q8WYA1 636 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 TAF4BQ92750 862 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 CHP1Q99653 195 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 PRDM12Q9H4Q4 367 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 NHEJ1Q9H9Q4 299 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-212ENST00000555254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.93■□□□□ 0.62
PSEN1-212ENST00000555254 PCDHB2Q9Y5E7 798 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 EPN1Q9Y6I3 576 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-212ENST00000555254 PTPRJQ12913 1337 aa18.93■□□□□ 0.62
PSEN1-212ENST00000555254 AKR1B10O60218 316 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 RECQL4O94761 1208 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 VNN1O95497 513 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 KRT19P08727 400 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 ITGA4P13612 1032 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 TBXAS1P24557 533 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-212ENST00000555254 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-212ENST00000555254 USP8P40818 1118 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 GATMP50440 423 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 JAM2P57087 298 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 KRT83P78385 493 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 RBP5P82980 135 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 BTG3Q14201 252 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-212ENST00000555254 SPA17Q15506 151 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 PAN2Q504Q3 1202 aaKnown RBP18.92■□□□□ 0.62
PSEN1-212ENST00000555254 WDR59Q6PJI9 974 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 SPRED2Q7Z698 418 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 EFCAB13Q8IY85 973 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 MYLIPQ8WY64 445 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 FAM122AQ96E09 287 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 SNX27Q96L92 541 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 PI4K2AQ9BTU6 479 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 NXF3Q9H4D5 531 aaKnown RBP18.92■□□□□ 0.62
PSEN1-212ENST00000555254 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-212ENST00000555254 IPPQ9Y573 584 aa18.92■□□□□ 0.62
PSEN1-212ENST00000555254 SSU72P8A0A1W2PR75 194 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 LINC01553A4QN01 128 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 F8VZ95 297 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 RFXAPO00287 272 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 DGKIO75912 1065 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 GFPT2O94808 682 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 NFICP08651 508 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 CCDC175P0C221 793 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 ATICP31939 592 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 EIF4A3P38919 411 aaKnown RBP18.91■□□□□ 0.62
PSEN1-212ENST00000555254 FAM189BP81408 668 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 GCNT1Q02742 428 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 TXLNBQ8N3L3 684 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 FIBCD1Q8N539 461 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 TATDN2Q93075 761 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 JAKMIP2Q96AA8 810 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 PGBD4Q96DM1 585 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 LUC7LQ9NQ29 371 aaKnown RBP18.91■□□□□ 0.62
PSEN1-212ENST00000555254 FAM105AQ9NUU6 356 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 DPP3Q9NY33 737 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 ITGA11Q9UKX5 1188 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 HES2Q9Y543 173 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.91■□□□□ 0.62
PSEN1-212ENST00000555254 NCOR1O75376 2440 aa18.91■□□□□ 0.62
PSEN1-212ENST00000555254 CDH23Q9H251 3354 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 GOLGA6L9A6NEM1 432 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 ZNF500O60304 480 aaPredicted RBP18.9■□□□□ 0.62
PSEN1-212ENST00000555254 FGFR1P11362 822 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 P4HA1P13674 534 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 AKAP5P24588 427 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 ANXA13P27216 316 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 MYL6P60660 151 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 YWHAEP62258 255 aaKnown RBP18.9■□□□□ 0.62
PSEN1-212ENST00000555254 NOP14P78316 857 aaKnown RBP18.9■□□□□ 0.62
PSEN1-212ENST00000555254 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 RAD9BQ6WBX8 426 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 ECHDC2Q86YB7 292 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 CCAR2Q8N163 923 aaKnown RBP18.9■□□□□ 0.62
PSEN1-212ENST00000555254 CRIPAKQ8N1N5 446 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 HELQQ8TDG4 1101 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 TMEM161AQ9NX61 479 aa18.9■□□□□ 0.62
PSEN1-212ENST00000555254 UBQLN1Q9UMX0 589 aaKnown RBP18.9■□□□□ 0.62
PSEN1-212ENST00000555254 A0A0U1RQF3 1178 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 TBKBP1A7MCY6 615 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 FOXN3O00409 490 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 NDUFA10O95299 355 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 BPIFB4P59827 614 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 SMYD5Q6GMV2 418 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 IRF2BP2Q7Z5L9 587 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 SMG8Q8ND04 991 aaKnown RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 FAM84AQ96KN4 292 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 TGS1Q96RS0 853 aaKnown RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 C17orf80Q9BSJ5 609 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 UBN1Q9NPG3 1134 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 KCND1Q9NSA2 647 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 TRMT1Q9NXH9 659 aaKnown RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 CNTN3Q9P232 1028 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 AJAP1Q9UKB5 411 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-212ENST00000555254 PPP2R2CQ9Y2T4 447 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 GIT1Q9Y2X7 761 aa18.89■□□□□ 0.61
PSEN1-212ENST00000555254 EIF3CLB5ME19 914 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms