RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 TWF1Q12792 350 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 FZD5Q13467 585 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZBTB41Q5SVQ8 909 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZNF687Q8N1G0 1237 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 BICD1Q96G01 975 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZSWIM3Q96MP5 696 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZFP14Q9HCL3 533 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 SPATA6Q9NWH7 488 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 TBX20Q9UMR3 447 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 YIPF1Q9Y548 306 aa17.07■□□□□ 0.32
ARHGEF40-205ENST00000555052 CHD8Q9HCK8 2581 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 HNRNPDLO14979 420 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 LAMTOR5O43504 91 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 ID4P47928 161 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 YWHAHQ04917 246 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 GRM2Q14416 872 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 KYAT1Q16773 422 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 CYP4A22Q5TCH4 519 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 SLC39A4Q6P5W5 647 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 GPBP1Q86WP2 473 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 ELMOD1Q8N336 334 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 SUMF1Q8NBK3 374 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 LEMD2Q8NC56 503 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 NELL1Q92832 810 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 SMARCD2Q92925 531 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZNF512Q96ME7 567 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 FIZ1Q96SL8 496 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 NELL2Q99435 816 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 OXCT2Q9BYC2 517 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 CRISPLD1Q9H336 500 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 TRPV4Q9HBA0 871 aa17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 TIMM13Q9Y5L4 95 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF40-205ENST00000555052 NCANO14594 1321 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 SCN1AP35498 2009 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 A0A0B4J269 797 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 K7ENM7 598 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 PPEF2O14830 753 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 OGTO15294 1046 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 LIG4P49917 911 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 GRIN1Q05586 938 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 VITQ6UXI7 678 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 ERMP1Q7Z2K6 904 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 MAP4K3Q8IVH8 894 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 SHKBP1Q8TBC3 707 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 LRRC3Q9BY71 257 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 BRD9Q9H8M2 597 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 PARVGQ9HBI0 331 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 TRPV5Q9NQA5 729 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 PRMT8Q9NR22 394 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 TSC2P49815 1807 aa17.05■□□□□ 0.32
ARHGEF40-205ENST00000555052 TICRRQ7Z2Z1 1910 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 ANK1P16157 1881 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 OR6C75A6NL08 312 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 SPTLC1O15269 473 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 XPOTO43592 962 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 FAM13AO94988 1023 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 OR4Q2P0C623 313 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 PLCG1P19174 1290 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 TYMPP19971 482 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 UBA7P41226 1012 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 GPR17Q13304 367 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 MCM6Q14566 821 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 SPATA1Q5VX52 437 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 TMC8Q8IU68 726 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 ZBTB44Q8NCP5 570 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 RUBCNQ92622 972 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 RAD54LQ92698 747 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 BORCS6Q96GS4 357 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 TRMT61BQ9BVS5 477 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 RPF1Q9H9Y2 349 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 MRPS17Q9Y2R5 130 aaKnown RBP17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 PCDHGA2Q9Y5H1 932 aa17.04■□□□□ 0.32
ARHGEF40-205ENST00000555052 CNOT1A5YKK6 2376 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 ARNTLO00327 626 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 NCAM2O15394 837 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 KINO60870 393 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 BMP15O95972 392 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 MYL4P12829 197 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 GJA1P17302 382 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 PSMC3P17980 439 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 LONP1P36776 959 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 VIPR2P41587 438 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 GTF2BQ00403 316 aa17.03■□□□□ 0.32
ARHGEF40-205ENST00000555052 CSTF1Q05048 431 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms