RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 KLHDC7AQ5VTJ3 777 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 GBP6Q6ZN66 633 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 FAM43BQ6ZT52 329 aaPredicted RBP18.66■□□□□ 0.58
SHOX-204ENST00000554971 COG1Q8WTW3 980 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 LPPQ93052 612 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 BICD1Q96G01 975 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 ACCSQ96QU6 501 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 C1orf112Q9NSG2 853 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 RNF19AQ9NV58 838 aa18.66■□□□□ 0.58
SHOX-204ENST00000554971 TDRD15B5MCY1 1934 aaKnown RBP18.65■□□□□ 0.58
SHOX-204ENST00000554971 H3BQF6 201 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 UPP2O95045 317 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 TNFRSF8P28908 595 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 LIG4P49917 911 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 RAPGEF1Q13905 1077 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 MYBPC2Q14324 1141 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 DPY19L2P1Q6NXN4 242 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 MPZL3Q6UWV2 235 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 TMEM192Q8IY95 271 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 ZSWIM2Q8NEG5 633 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 GOLGA5Q8TBA6 731 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 TLR10Q9BXR5 811 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 RC3H2Q9HBD1 1191 aaKnown RBP18.65■□□□□ 0.58
SHOX-204ENST00000554971 STYXL1Q9Y6J8 313 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 PDCD11Q14690 1871 aaKnown RBP18.65■□□□□ 0.58
SHOX-204ENST00000554971 COL6A3P12111 3177 aa18.65■□□□□ 0.58
SHOX-204ENST00000554971 ZNF185O15231 689 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 GJB5O95377 273 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 UCHL3P15374 230 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.58
SHOX-204ENST00000554971 GATMP50440 423 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 MCL1Q07820 350 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 TMEM132AQ24JP5 1023 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 ZNF568Q3ZCX4 644 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 AGMOQ6ZNB7 445 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 MRPL10Q7Z7H8 261 aaKnown RBP18.64■□□□□ 0.58
SHOX-204ENST00000554971 ZBTB33Q86T24 672 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 VPS36Q86VN1 386 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 SPAG5Q96R06 1193 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 CXCL16Q9H2A7 254 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 CALCOCO1Q9P1Z2 691 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 INTUQ9ULD6 942 aa18.64■□□□□ 0.58
SHOX-204ENST00000554971 A0A0B4J269 797 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 CLDN3O15551 220 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 MEFVO15553 781 aaPredicted RBP18.64■□□□□ 0.57
SHOX-204ENST00000554971 AMHP03971 560 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 FGFR1P11362 822 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 PON1P27169 355 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.57
SHOX-204ENST00000554971 SEZ6Q53EL9 994 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 ZBTB41Q5SVQ8 909 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 IRF2BP2Q7Z5L9 587 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 SLC9A7Q96T83 725 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 CBWD1Q9BRT8 395 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 CRACR2AQ9BSW2 395 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 TMEM206Q9H813 350 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 TMEM161AQ9NX61 479 aa18.64■□□□□ 0.57
SHOX-204ENST00000554971 KIAA1671Q9BY89 1806 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 RALGAPA2Q2PPJ7 1873 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 PSMC2P35998 433 aaKnown RBP18.63■□□□□ 0.57
SHOX-204ENST00000554971 RAB27AP51159 221 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 CLLU1OSQ5K130 101 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 NPAS4Q8IUM7 802 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 TCHPQ9BT92 498 aa18.63■□□□□ 0.57
SHOX-204ENST00000554971 TRIM6Q9C030 488 aaPredicted RBP18.63■□□□□ 0.57
SHOX-204ENST00000554971 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
SHOX-204ENST00000554971 ELAC1Q9H777 363 aaKnown RBP18.63■□□□□ 0.57
SHOX-204ENST00000554971 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
SHOX-204ENST00000554971 AKAP3O75969 853 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 EOMESO95936 686 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 HARSP12081 509 aaKnown RBP18.62■□□□□ 0.57
SHOX-204ENST00000554971 AKAP5P24588 427 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 RABGGTBP53611 331 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 NAP1L1P55209 391 aaKnown RBP18.62■□□□□ 0.57
SHOX-204ENST00000554971 DCAF4L1Q3SXM0 396 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 SYCP3Q8IZU3 236 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 RNF169Q8NCN4 708 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 TMEM174Q8WUU8 243 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 BORCS6Q96GS4 357 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 ADPGKQ9BRR6 497 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 SNTG2Q9NY99 539 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 SALL4Q9UJQ4 1053 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 DGKIO75912 1065 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 MCF2P10911 925 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 MEI1Q5TIA1 1274 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 AENQ8WTP8 325 aaKnown RBP18.62■□□□□ 0.57
SHOX-204ENST00000554971 SLC35C1Q96A29 364 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 ZNF689Q96CS4 500 aaPredicted RBP18.62■□□□□ 0.57
SHOX-204ENST00000554971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.62■□□□□ 0.57
SHOX-204ENST00000554971 AGPAT3Q9NRZ7 376 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 EXOC7Q9UPT5 735 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 PCDHB7Q9Y5E2 793 aa18.62■□□□□ 0.57
SHOX-204ENST00000554971 NLRC5Q86WI3 1866 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 A0A087X0T9 212 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 FAM228BP0C875 321 aa18.61■□□□□ 0.57
SHOX-204ENST00000554971 MYOGP15173 224 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms