RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PLEKHN1Q494U1 663 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-228ENST00000554592 FAM47CQ5HY64 1035 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 MBLAC2Q68D91 279 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 NFRKBQ6P4R8 1299 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 CTR9Q6PD62 1173 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 KCNT2Q6UVM3 1135 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 IGDCC3Q8IVU1 814 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 CCDC103Q8IW40 242 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 RPAP2Q8IXW5 612 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-228ENST00000554592 TMEFF1Q8IYR6 380 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 GSTCDQ8NEC7 633 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-228ENST00000554592 NEK9Q8TD19 979 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PTPRN2Q92932 1015 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 MFSD3Q96ES6 412 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PRRX2Q99811 253 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 MTA3Q9BTC8 594 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 TRIM39Q9HCM9 518 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 VTA1Q9NP79 307 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 A1CFQ9NQ94 594 aaKnown RBP5.73□□□□□ -1.49
ATXN3-228ENST00000554592 CLEC1BQ9P126 229 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 CLIP2Q9UDT6 1046 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 NDOR1Q9UHB4 597 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 SYNPO2Q9UMS6 1093 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 PCDHA5Q9Y5H7 936 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 HCFC2Q9Y5Z7 792 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 ATAD5Q96QE3 1844 aa5.73□□□□□ -1.49
ATXN3-228ENST00000554592 SMCHD1A6NHR9 2005 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 FRMPD3Q5JV73 1810 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 MUC6Q6W4X9 2439 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 LOC102724159A0A0B4J2E5 919 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ABHD14A-ACY1A0A1B0GW23 586 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 LCHNA4D1U4 455 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 LINC01553A4QN01 128 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 EFCAB14O75071 495 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 GJB5O95377 273 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 CYBBP04839 570 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ZSCAN22P10073 491 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 GLI4P10075 376 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PTGS1P23219 599 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ADD2P35612 726 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 MAPKAPK2P49137 400 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 WDR5P61964 334 aaKnown RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 NR1I3Q14994 352 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PWP2Q15269 919 aaKnown RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 UBE3CQ15386 1083 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 TESK1Q15569 626 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 HSP90AB4PQ58FF6 505 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ACBD5Q5T8D3 534 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 SLFN13Q68D06 897 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PAQR3Q6TCH7 311 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 CPNE8Q86YQ8 564 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PPIL6Q8IXY8 311 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ZNF444Q8N0Y2 327 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 CAGE1Q8TC20 777 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PANK1Q8TE04 598 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 MORC4Q8TE76 937 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 GDPD5Q8WTR4 605 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 MZB1Q8WU39 189 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 CHURC1Q8WUH1 139 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 DCAF4Q8WV16 495 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 STAG1Q8WVM7 1258 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 FRAT1Q92837 279 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 WDR11Q9BZH6 1224 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ZNF287Q9HBT7 754 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 HOMER2Q9NSB8 354 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 RNF146Q9NTX7 359 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 SIRT5Q9NXA8 310 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 ADD3Q9UEY8 706 aaKnown RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 TRAF6Q9Y4K3 522 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 NPFFR2Q9Y5X5 522 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 SLC4A4Q9Y6R1 1079 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 TCF20Q9UGU0 1960 aaKnown RBP5.72□□□□□ -1.49
ATXN3-228ENST00000554592 MYO9BQ13459 2157 aa5.72□□□□□ -1.49
ATXN3-228ENST00000554592 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.49
ATXN3-228ENST00000554592 PLXNA1Q9UIW2 1896 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 A0A087X0B3 334 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 IGKV6D-41A0A0C4DH26 115 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 C7orf72A4D263 438 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 TMEM232C9JQI7 657 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 MEFVO15553 781 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 NCK2O43639 380 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 PLA2G6O60733 806 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 DNAJC8O75937 253 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 TTLL1O95922 423 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 ALAS1P13196 640 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms