RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 VIMP08670 466 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 RARAP10276 462 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 ITGB5P18084 799 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CCND1P24385 295 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 STX2P32856 288 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CAP2P40123 477 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 ELF3P78545 371 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 LACTBP83111 547 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 MAP2K1Q02750 393 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 GRM1Q13255 1194 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 KLF1Q13351 362 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TNFAIP1Q13829 316 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 HIC1Q14526 733 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CRYMQ14894 314 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PSMD6Q15008 389 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 MTFR1Q15390 333 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 DLGAP5Q15398 846 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 SURF1Q15526 300 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PARP6Q2NL67 630 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PUS10Q3MIT2 529 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 GALNTL6Q49A17 601 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 MORN1Q5T089 497 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 MEX3CQ5U5Q3 659 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 WDR78Q5VTH9 848 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TTC27Q6P3X3 843 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 RSBN1LQ6PCB5 846 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TREML4Q6UXN2 200 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 C15orf39Q6ZRI6 1047 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 EXOC3L1Q86VI1 746 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PALB2Q86YC2 1186 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PHF13Q86YI8 300 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 LRRC34Q8IZ02 419 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 MCOLN2Q8IZK6 566 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 OGFOD1Q8N543 542 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 ZCCHC9Q8N567 271 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 BANK1Q8NDB2 785 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TMEM161BQ8NDZ6 487 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 AGBL3Q8NEM8 1001 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 DDX1Q92499 740 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 INPP5DQ92835 1189 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 ALKBH8Q96BT7 664 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CCDC97Q96F63 343 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 KREMEN1Q96MU8 473 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 SCLT1Q96NL6 688 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PCDHB18PQ96TA0 734 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 PRMT1Q99873 361 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CBWD1Q9BRT8 395 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TUBB6Q9BUF5 446 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 ZNF518BQ9C0D4 1074 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 KIAA1683Q9H0B3 1180 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 SEMA4AQ9H3S1 761 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 RABEP2Q9H5N1 569 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 FAM124BQ9H5Z6 455 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TDRD3Q9H7E2 651 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 EBF2Q9HAK2 575 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 VEZTQ9HBM0 779 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 KMT5AQ9NQR1 393 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 DDX56Q9NY93 547 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 NOP53Q9NZM5 478 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 WRAP73Q9P2S5 460 aaPredicted RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CTNNAL1Q9UBT7 734 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 IP6K2Q9UHH9 426 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 SLC24A2Q9UI40 661 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 MCM8Q9UJA3 840 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 SHOC2Q9UQ13 582 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 CNTN6Q9UQ52 1028 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 DRG1Q9Y295 367 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 STARD13Q9Y3M8 1113 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 NR2E1Q9Y466 385 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 STYXL1Q9Y6J8 313 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 LRRC37A2A6NM11 1700 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 BRCA1P38398 1863 aaKnown RBP5.71□□□□□ -1.5
CCNT1-204ENST00000551989 RALGAPA2Q2PPJ7 1873 aa5.71□□□□□ -1.5
CCNT1-204ENST00000551989 TMEM120BA0PK00 339 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 FAM47DPA6NHR8 397 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 FAM196BA6NMK8 535 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 TMEM110-MUSTN1A8MSY1 372 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PHF20L1A8MW92 1017 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 DCDC2CA8MYV0 355 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 UBAP1LF5GYI3 381 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ABLIM1O14639 778 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 DNALI1O14645 258 aaPredicted RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 GPR37O15354 613 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CYP26A1O43174 497 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 TJP3O95049 919 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ADRB2P07550 413 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PSAPP07602 524 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CCNB1P14635 433 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 BRAFP15056 766 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 NQO1P15559 274 aaKnown RBP5.7□□□□□ -1.5
CCNT1-204ENST00000551989 FGFR4P22455 802 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 IVDP26440 423 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CNGA1P29973 690 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CCND2P30279 289 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ALDH3A1P30838 453 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ELF1P32519 619 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 PHBP35232 272 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 ECE1P42892 770 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 NPTX2P47972 431 aa5.7□□□□□ -1.5
CCNT1-204ENST00000551989 CCNG1P51959 295 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms