RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 UBQLN1Q9UMX0 589 aaKnown RBP23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 F5P12259 2224 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 SPTLC1O15269 473 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 TNFSF9P41273 254 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 MATR3P43243 847 aaKnown RBP eCLIP23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 YWHAHQ04917 246 aaPredicted RBP23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 GRM2Q14416 872 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 MAP4K3Q8IVH8 894 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 ZNF687Q8N1G0 1237 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 DCLK2Q8N568 766 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 ZBTB44Q8NCP5 570 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 SMARCD2Q92925 531 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 KIF12Q96FN5 646 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 OXCT2Q9BYC2 517 aaPredicted RBP23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 TRPV5Q9NQA5 729 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 ODF2LQ9ULJ1 636 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 PCDHGA2Q9Y5H1 932 aa23.62■■□□□ 1.37
SMARCC2-210ENST00000550519 SLC26A4O43511 780 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 FAM189A1O60320 539 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 VNN2O95498 520 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 ADRB2P07550 413 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 VITQ6UXI7 678 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 IRF7Q92985 503 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 BICD1Q96G01 975 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 TMX3Q96JJ7 454 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 AK8Q96MA6 479 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 HINFPQ9BQA5 517 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 TRPV4Q9HBA0 871 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 ASAH2Q9NR71 780 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 YIPF1Q9Y548 306 aa23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 TIMM13Q9Y5L4 95 aaPredicted RBP23.61■■□□□ 1.37
SMARCC2-210ENST00000550519 LACTBL1A8MY62 500 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 MAN2B1O00754 1011 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 PIGRP01833 764 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 MYL4P12829 197 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 PSMC3P17980 439 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 SCP2P22307 547 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 GJB2P29033 226 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 PPP2R3AQ06190 1150 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 ENOX2Q16206 610 aaKnown RBP23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 KYAT1Q16773 422 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 LRRC15Q8TF66 581 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 TSPAN18Q96SJ8 248 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 REEP2Q9BRK0 252 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 LRRC3Q9BY71 257 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 ZNF334Q9HCZ1 680 aaPredicted RBP23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 PRMT8Q9NR22 394 aaPredicted RBP23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 ZSCAN32Q9NX65 697 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 TBX20Q9UMR3 447 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 CEP250Q9BV73 2442 aa23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 PDCD11Q14690 1871 aaKnown RBP23.6■■□□□ 1.37
SMARCC2-210ENST00000550519 PATJQ8NI35 1801 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 H3BQV1 296 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 OGTO15294 1046 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 LILRB5O75023 590 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 OR4Q2P0C623 313 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 GJA1P17302 382 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 VIPR2P41587 438 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 LIG4P49917 911 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 ZNF131P52739 623 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 GPR17Q13304 367 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 ZSCAN18Q8TBC5 510 aaPredicted RBP23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 DEPDC1BQ8WUY9 529 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 ATRIPQ8WXE1 791 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 CRISPLD1Q9H336 500 aa23.59■■□□□ 1.37
SMARCC2-210ENST00000550519 OR6C75A6NL08 312 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 HNRNPDLO14979 420 aaKnown RBP23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 XPOTO43592 962 aaKnown RBP23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 GDI1P31150 447 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 GUCY2FP51841 1108 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 MTAPQ13126 283 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 TEAD2Q15562 447 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 USP37Q86T82 979 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 GPBP1Q86WP2 473 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 SHKBP1Q8TBC3 707 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 GPR88Q9GZN0 384 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 DNAJC25Q9H1X3 360 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 BLOC1S4Q9NUP1 217 aa23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 NDRG2Q9UN36 371 aaKnown RBP23.58■■□□□ 1.37
SMARCC2-210ENST00000550519 A0A0B4J269 797 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 TYMPP19971 482 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 DUSP4Q13115 394 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 PLD1Q13393 1074 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 SPATA1Q5VX52 437 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 DSTYKQ6XUX3 929 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 MAMSTRQ6ZN01 415 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 TMC8Q8IU68 726 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 MFSD6LQ8IWD5 586 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 PGLYRP2Q96PD5 576 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 CHRDQ9H2X0 955 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 RPF1Q9H9Y2 349 aaKnown RBP23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 NCANO14594 1321 aa23.57■■□□□ 1.36
SMARCC2-210ENST00000550519 MYH11P35749 1972 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 ARNTLO00327 626 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 PPEF2O14830 753 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 CD2BP2O95400 341 aaKnown RBP23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 UBA7P41226 1012 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 MYBPC2Q14324 1141 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 OVOS1Q6IE37 1185 aa23.56■■□□□ 1.36
SMARCC2-210ENST00000550519 CENPPQ6IPU0 288 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms