RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 XYLT2Q9H1B5 865 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 SMYD3Q9H7B4 428 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 NRDE2Q9H7Z3 1164 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 KANSL3Q9P2N6 904 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 DNAJB4Q9UDY4 337 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 CAPN11Q9UMQ6 739 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 PRG3Q9Y2Y8 225 aaPredicted RBP8.74□□□□□ -1.01
GPN3-207ENST00000550228 SNX9Q9Y5X1 595 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 KIAA1671Q9BY89 1806 aa8.74□□□□□ -1.01
GPN3-207ENST00000550228 F8W810 466 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 PIRO00625 290 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 SPTLC1O15269 473 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 CAPN15O75808 1086 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 DGKIO75912 1065 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 GFPT2O94808 682 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 KIF4AO95239 1232 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 WEE2P0C1S8 567 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 KRT5P13647 590 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 P4HA1P13674 534 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 RFX1P22670 979 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 TBXAS1P24557 533 aaPredicted RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 RPL9P32969 192 aaKnown RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 PBX3P40426 434 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 PNPLA4P41247 253 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 ASPAP45381 313 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 BRCC3P46736 316 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 GSDMDP57764 484 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 ZBED6P86452 979 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 ARID5AQ03989 594 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 DSC1Q08554 894 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 BTG3Q14201 252 aaPredicted RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 ASIC2Q16515 512 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 TSR1Q2NL82 804 aaKnown RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 SV2CQ496J9 727 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 SPOUT1Q5T280 376 aaKnown RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 SFMBT2Q5VUG0 894 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 CNGA4Q8IV77 575 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 COLGALT2Q8IYK4 626 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 TC2NQ8N9U0 490 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 C3orf58Q8NDZ4 430 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 HERVK_113Q902F9 699 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 BAP1Q92560 729 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 UROC1Q96N76 676 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 YME1L1Q96TA2 773 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 ZBED2Q9BTP6 218 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 NAA15Q9BXJ9 866 aaKnown RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 STK33Q9BYT3 514 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 EDEM3Q9BZQ6 932 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 SDCBP2Q9H190 292 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 MTIF3Q9H2K0 278 aaKnown RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 ABHD10Q9NUJ1 306 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 PCDHB4Q9Y5E5 795 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.73□□□□□ -1.01
GPN3-207ENST00000550228 SLC4A7Q9Y6M7 1214 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 TSC2P49815 1807 aa8.73□□□□□ -1.01
GPN3-207ENST00000550228 KPNA7A9QM74 516 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 NT5C1B-RDH14C9J2C7 533 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 F8VZ95 297 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 I3L4J1 428 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 FOXN3O00409 490 aaPredicted RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 B3GAT3O94766 335 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 STAU1O95793 577 aaKnown RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 ITGB1P05556 798 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 ATP2A2P16615 1042 aaKnown RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 SOX5P35711 763 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 STAT1P42224 750 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 SLC11A1P49279 550 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 CDH8P55286 799 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 BCAR1P56945 870 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 JAM2P57087 298 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 LILRA4P59901 499 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 YWHAEP62258 255 aaKnown RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 GCNT1Q02742 428 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 UPP1Q16831 310 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 C9orf50Q5SZB4 431 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 E4F1Q66K89 784 aaPredicted RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 DSTYKQ6XUX3 929 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 SENP8Q96LD8 212 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 FAM81BQ96LP2 452 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 RNPC3Q96LT9 517 aaKnown RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 ZNF830Q96NB3 372 aaPredicted RBP8.72□□□□□ -1.01
GPN3-207ENST00000550228 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 GPR88Q9GZN0 384 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 VRTNQ9H8Y1 702 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 FBXL5Q9UKA1 691 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 DAAM1Q9Y4D1 1078 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 GBF1Q92538 1859 aa8.72□□□□□ -1.01
GPN3-207ENST00000550228 H0YGN5 161 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 CYB561D2O14569 222 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 NRP1O14786 923 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 HUS1O60921 280 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 TADA2AO75478 443 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 GJB5O95377 273 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 CALCAP01258 141 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 SKILP12757 684 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 ACO1P21399 889 aaKnown RBP8.71□□□□□ -1.02
GPN3-207ENST00000550228 ORC1Q13415 861 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 SHHQ15465 462 aa8.71□□□□□ -1.02
GPN3-207ENST00000550228 TIGD5Q53EQ6 642 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms