RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CDY1Q9Y6F8 540 aa28.03■■■□□ 2.08
CPSF6-205ENST00000550075 MTCL1Q9Y4B5 1905 aaKnown RBP28.02■■■□□ 2.08
CPSF6-205ENST00000550075 NR3C1P04150 777 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 OR1D2P34982 312 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 MTHFRP42898 656 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 CYP24A1Q07973 514 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 RAB33AQ14088 237 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 PSMD6Q15008 389 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 LIN9Q5TKA1 542 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 TMEM130Q8N3G9 435 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 NECTIN4Q96NY8 510 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 OXCT2Q9BYC2 517 aaPredicted RBP28.02■■■□□ 2.08
CPSF6-205ENST00000550075 MTMR12Q9C0I1 747 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 INTS13Q9NVM9 706 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 TRAF3IP3Q9Y228 551 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 PCDHA5Q9Y5H7 936 aa28.02■■■□□ 2.08
CPSF6-205ENST00000550075 ITGB3P05106 788 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 TYMPP19971 482 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 YWHAHQ04917 246 aaPredicted RBP28.01■■■□□ 2.07
CPSF6-205ENST00000550075 CBX2Q14781 532 aaPredicted RBP28.01■■■□□ 2.07
CPSF6-205ENST00000550075 DUOXA2Q1HG44 320 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 CTXN3Q4LDR2 81 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 ZNF658Q5TYW1 1059 aaPredicted RBP28.01■■■□□ 2.07
CPSF6-205ENST00000550075 LRRC52Q8N7C0 313 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 C1orf127Q8N9H9 656 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 KREMEN2Q8NCW0 462 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 CMASQ8NFW8 434 aaPredicted RBP28.01■■■□□ 2.07
CPSF6-205ENST00000550075 SPATA20Q8TB22 786 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 SUSD6Q92537 303 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 SENP8Q96LD8 212 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 FBXW11Q9UKB1 542 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 DSEQ9UL01 958 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 MAPK8IP1Q9UQF2 711 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 SCN1AP35498 2009 aa28.01■■■□□ 2.07
CPSF6-205ENST00000550075 DLATP10515 647 aaKnown RBP28■■■□□ 2.07
CPSF6-205ENST00000550075 TNNI1P19237 187 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 POLR2BP30876 1174 aaKnown RBP28■■■□□ 2.07
CPSF6-205ENST00000550075 MRPL58Q14197 206 aaKnown RBP28■■■□□ 2.07
CPSF6-205ENST00000550075 SLC8B1Q6J4K2 584 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 LILRA6Q6PI73 481 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 ADHFE1Q8IWW8 467 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 C12orf76Q8N812 135 aaPredicted RBP28■■■□□ 2.07
CPSF6-205ENST00000550075 GBP4Q96PP9 640 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 CGRRF1Q99675 332 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 DMAC2Q9NW81 257 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 AGAP1Q9UPQ3 857 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 FRMD4BQ9Y2L6 1034 aa28■■■□□ 2.07
CPSF6-205ENST00000550075 KRT19P08727 400 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 RPL13P26373 211 aaKnown RBP27.99■■■□□ 2.07
CPSF6-205ENST00000550075 RBP5P82980 135 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 NFIL3Q16649 462 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 LMBRD2Q68DH5 695 aaPredicted RBP27.99■■■□□ 2.07
CPSF6-205ENST00000550075 TMC5Q6UXY8 1006 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 CYP26C1Q6V0L0 522 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 C15orf39Q6ZRI6 1047 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 CLEC17AQ6ZS10 378 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 CSGALNACT2Q8N6G5 542 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 CCDC127Q96BQ5 260 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 ZDHHC7Q9NXF8 308 aa27.99■■■□□ 2.07
CPSF6-205ENST00000550075 TSC2P49815 1807 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 DLL1O00548 723 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 SPTLC1O15269 473 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 ADAM12O43184 909 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 SPATA31D3P0C874 917 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 STIM1Q13586 685 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 COBLL1Q53SF7 1204 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 ATAT1Q5SQI0 421 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 OVOS1Q6IE37 1185 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 SPATA31D4Q6ZUB0 917 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 METTL23Q86XA0 190 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 SMYD4Q8IYR2 804 aaPredicted RBP27.98■■■□□ 2.07
CPSF6-205ENST00000550075 MFSD14AQ96MC6 490 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 PHF7Q9BWX1 381 aaPredicted RBP27.98■■■□□ 2.07
CPSF6-205ENST00000550075 TSHZ2Q9NRE2 1034 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 FBXL5Q9UKA1 691 aa27.98■■■□□ 2.07
CPSF6-205ENST00000550075 KPNA7A9QM74 516 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 OAZ2O95190 189 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 NR2F2P24468 414 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 PPP1R2P41236 205 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 ROR1Q01973 937 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 ZP2Q05996 745 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 MYO1EQ12965 1108 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 CEP135Q66GS9 1140 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 CCDC149Q6ZUS6 474 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 GPR149Q86SP6 731 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 ERCC4Q92889 916 aaPredicted RBP27.97■■■□□ 2.07
CPSF6-205ENST00000550075 NECAB3Q96P71 396 aaPredicted RBP27.97■■■□□ 2.07
CPSF6-205ENST00000550075 TSG101Q99816 390 aa27.97■■■□□ 2.07
CPSF6-205ENST00000550075 TIMM13Q9Y5L4 95 aaPredicted RBP27.97■■■□□ 2.07
CPSF6-205ENST00000550075 PTPRJQ12913 1337 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 OR6C75A6NL08 312 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 CYB561D2O14569 222 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 TBC1D4O60343 1298 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 ZMYND10O75800 440 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 CYP11A1P05108 521 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 CPB1P15086 417 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 SSTR3P32745 418 aaPredicted RBP27.96■■■□□ 2.07
CPSF6-205ENST00000550075 AP3M2P53677 418 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 ARPP19P56211 112 aa27.96■■■□□ 2.07
CPSF6-205ENST00000550075 BFSP1Q12934 665 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms