RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 GTF3C4Q9UKN8 822 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 DNPEPQ9ULA0 475 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 PCDHB2Q9Y5E7 798 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 C4AP0C0L4 1744 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 C4BP0C0L5 1744 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 FAM187AA6NFU0 413 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 B4GALT5O43286 388 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 SSTR1P30872 391 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 IL9RQ01113 521 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 BYSLQ13895 437 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 DHX34Q14147 1143 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 KAT2BQ92831 832 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 FAF2Q96CS3 445 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 CALR3Q96L12 384 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 AGAP3Q96P47 875 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 CYTH2Q99418 400 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 METTL5Q9NRN9 209 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 ABCF3Q9NUQ8 709 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 SNX9Q9Y5X1 595 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 CFAP69A5D8W1 941 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 KIAA0391O15091 583 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 ITGB3P05106 788 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 APRTP07741 180 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 LCP1P13796 627 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 ATP2A2P16615 1042 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 CUL2Q13617 745 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 FAM160B1Q5W0V3 765 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 ATL2Q8NHH9 583 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 MYH3P11055 1940 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 ITGB4P16144 1822 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 LOC102724159A0A0B4J2E5 919 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 ADM5C9JUS6 153 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 GPC3P51654 580 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 PWP2Q15269 919 aaKnown RBP8.93□□□□□ -0.98
TMTC2-202ENST00000546590 HYIQ5T013 277 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 DTX3LQ8TDB6 740 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 HES6Q96HZ4 224 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 MED10Q9BTT4 135 aa8.93□□□□□ -0.98
TMTC2-202ENST00000546590 A6NNZ2 444 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 MCF2LO15068 1137 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 CST3P01034 146 aaPredicted RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 PDHA1P08559 390 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TARSP26639 723 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ARL1P40616 181 aaPredicted RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 PRKCIP41743 596 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 MAGEA4P43358 317 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 DUOXA2Q1HG44 320 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TUBB8Q3ZCM7 444 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 FYB2Q5VWT5 728 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ERP27Q96DN0 273 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TMEM237Q96Q45 408 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TRABDQ9H4I3 376 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 HOXC10Q9NYD6 342 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 HES2Q9Y543 173 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 NUB1Q9Y5A7 615 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 LAMB4A4D0S4 1761 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 DDX3YO15523 660 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 CREB3O43889 395 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 SKAP2O75563 359 aaPredicted RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TOM1L1O75674 476 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 UBOX5O94941 541 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TJP3O95049 919 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 MT-ND3P03897 115 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TMEM132BQ14DG7 1078 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TDRD10Q5VZ19 366 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 PCNX4Q63HM2 1172 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 C11orf63Q6NUN7 778 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 MCOLN2Q8IZK6 566 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 SLCO1B3Q9NPD5 702 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TJP2Q9UDY2 1190 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 NR2E3Q9Y5X4 410 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 PKD1L3Q7Z443 1732 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ARHGAP42A6NI28 874 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 RIPK2O43353 540 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 PRPSAP2O60256 369 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 UPP2O95045 317 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 NPTXRO95502 500 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ZNF286BP0CG31 522 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 POLR2BP30876 1174 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ATXN3P54252 364 aaPredicted RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ITIH3Q06033 890 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 EFCAB12Q6NXP0 572 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 TRPM4Q8TD43 1214 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ZNF606Q8WXB4 792 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 LPAR1Q92633 364 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 DHX35Q9H5Z1 703 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 CNOT10Q9H9A5 744 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 HESX1Q9UBX0 185 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 PNMA3Q9UL41 463 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ADGRA3Q8IWK6 1321 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ZMYM2Q9UBW7 1377 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 CAPN9O14815 690 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 OATP04181 439 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 HSPA6P17066 643 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 SESN2P58004 480 aaPredicted RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 NME3Q13232 169 aa8.92□□□□□ -0.98
TMTC2-202ENST00000546590 FASTKD3Q14CZ7 662 aaKnown RBP8.92□□□□□ -0.98
TMTC2-202ENST00000546590 ARHGEF18Q6ZSZ5 1173 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms