RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 OAZ2O95190 189 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 KIF20AO95235 890 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 NFICP08651 508 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 WEE2P0C1S8 567 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 ATF2P15336 505 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 SYKP43405 635 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 AFMP43652 599 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 MRE11P49959 708 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 LILRA4P59901 499 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 ZXDAP98168 799 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 SPAG1Q07617 926 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 EHHADHQ08426 723 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 MTMR3Q13615 1198 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 C9orf57Q5W0N0 161 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 CRELD2Q6UXH1 353 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-216ENST00000544989 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 EPM2AIP1Q7L775 607 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-216ENST00000544989 NXPE3Q969Y0 559 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-216ENST00000544989 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 RBAKQ9NYW8 714 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-216ENST00000544989 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 SORCS3Q9UPU3 1222 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 HPSEQ9Y251 543 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
HDAC4-216ENST00000544989 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 ZNF233A6NK53 670 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 ABLIM3O94929 683 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 TAF6P49848 677 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 ROR1Q01973 937 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 MYBPC2Q14324 1141 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 SV2CQ496J9 727 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 KANK3Q6NY19 840 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 TCEAL8Q8IYN2 117 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 ELMOD1Q8N336 334 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 SLC7A14Q8TBB6 771 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 SAAL1Q96ER3 474 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 PAGE5Q96GU1 130 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 CBWD1Q9BRT8 395 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 IGSF9Q9P2J2 1179 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
HDAC4-216ENST00000544989 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 ITGA11Q9UKX5 1188 aa12.77□□□□□ -0.37
HDAC4-216ENST00000544989 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 PRRG1O14668 218 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 ADAM12O43184 909 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 PRPF40AO75400 957 aaKnown RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 LRG1P02750 347 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 CYP11A1P05108 521 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 CPB1P15086 417 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 SP100P23497 879 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 IGFBP6P24592 240 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 TFAMQ00059 246 aaKnown RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 NHLH1Q02575 133 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 SMARCB1Q12824 385 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 PLD1Q13393 1074 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 CUL4BQ13620 913 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 KNOP1Q1ED39 458 aaKnown RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 TRIM67Q6ZTA4 783 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 ANKRD36BP1Q96IX9 119 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 MFSD14AQ96MC6 490 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 FGFBP2Q9BYJ0 223 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 BLZF1Q9H2G9 400 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 AVENQ9NQS1 362 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 HSPBP1Q9NZL4 362 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 CDH22Q9UJ99 828 aa12.76□□□□□ -0.37
HDAC4-216ENST00000544989 ZFHX2Q9C0A1 2572 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-216ENST00000544989 WDR27A2RRH5 827 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 FAM86C2PA6NEL3 165 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 FSHRP23945 695 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 GUCY2FP51841 1108 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 ARPP19P56211 112 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 RBP5P82980 135 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
HDAC4-216ENST00000544989 BMP8AQ7Z5Y6 402 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 FSIP1Q8NA03 581 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 XXYLT1Q8NBI6 393 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 LEMD2Q8NC56 503 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 SPATA18Q8TC71 538 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
HDAC4-216ENST00000544989 SCFD1Q8WVM8 642 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
HDAC4-216ENST00000544989 CYP4F11Q9HBI6 524 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms