RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 LIMCH1Q9UPQ0 1083 aa14.29□□□□□ -0.12
SCARB1-207ENST00000541661 NCANO14594 1321 aa14.29□□□□□ -0.12
SCARB1-207ENST00000541661 HEPACAM2A8MVW5 462 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 SLC16A4O15374 487 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 PAPSS2O95340 614 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-207ENST00000541661 VNN2O95498 520 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 RETP07949 1114 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 MYL4P12829 197 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 CPB1P15086 417 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 GJA1P17302 382 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.12
SCARB1-207ENST00000541661 MARCKSP29966 332 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-207ENST00000541661 LRPAP1P30533 357 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 CXCL12P48061 93 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-207ENST00000541661 FCHO2Q0JRZ9 810 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 PTGDRQ13258 359 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 GAS6Q14393 721 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 NBR1Q14596 966 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 KRT79Q5XKE5 535 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 SPEM1Q8N4L4 309 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
SCARB1-207ENST00000541661 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-207ENST00000541661 DCDC2BA2VCK2 349 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 LAD1O00515 517 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 CHADO15335 359 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 CYP3A5P20815 502 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 CCNE1P24864 410 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 CNR2P34972 360 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 PRPHP41219 470 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 AARSP49588 968 aaKnown RBP eCLIP14.27□□□□□ -0.134e-6■■■■■ 30.6
SCARB1-207ENST00000541661 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 SATB1Q01826 763 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 YWHAHQ04917 246 aaPredicted RBP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 MCL1Q07820 350 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 STRN3Q13033 797 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 PLD1Q13393 1074 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 NOLC1Q14978 699 aaKnown RBP eCLIP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 TEAD2Q15562 447 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 ZBTB6Q15916 424 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 IL17AQ16552 155 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 KCNK18Q7Z418 384 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 TMC8Q8IU68 726 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 CCDC83Q8IWF9 413 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 TMEM161BQ8NDZ6 487 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 RSPRY1Q96DX4 576 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 C8orf33Q9H7E9 229 aaPredicted RBP14.27□□□□□ -0.13
SCARB1-207ENST00000541661 TUBGCP4Q9UGJ1 667 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 YIPF1Q9Y548 306 aa14.27□□□□□ -0.13
SCARB1-207ENST00000541661 TTC26A0AVF1 554 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 PP2D1A8MPX8 630 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 CLDN3O15551 220 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 MAPTP10636 758 aaKnown RBP14.26□□□□□ -0.13
SCARB1-207ENST00000541661 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
SCARB1-207ENST00000541661 PLS3P13797 630 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 SMTNP53814 917 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 GPR17Q13304 367 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 SEZ6Q53EL9 994 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 HYIQ5T013 277 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 NETO1Q8TDF5 533 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 CSGALNACT1Q8TDX6 532 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 KCNN1Q92952 543 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 HAPLN2Q9GZV7 340 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 DNAJC25Q9H1X3 360 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 ASB3Q9Y575 518 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 NUP210Q8TEM1 1887 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-207ENST00000541661 EPG5Q9HCE0 2579 aa14.26□□□□□ -0.13
SCARB1-207ENST00000541661 RALGAPA1Q6GYQ0 2036 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 MYBPHLA2RUH7 354 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 OR6C75A6NL08 312 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 K7ESF4 209 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 SLC30A4O14863 429 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 HRO43593 1189 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 ADRB1P08588 477 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 CLTAP09496 248 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 CDC25AP30304 524 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 EPHB3P54753 998 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 DUSP4Q13115 394 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 LRRC32Q14392 662 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 LPAL2Q16609 132 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 DTHD1Q6ZMT9 781 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 YAF2Q8IY57 180 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 SYT2Q8N9I0 419 aaPredicted RBP14.25□□□□□ -0.13
SCARB1-207ENST00000541661 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 MKNK1Q9BUB5 465 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 CRISPLD1Q9H336 500 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 SLITRK6Q9H5Y7 841 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 ANKFY1Q9P2R3 1169 aa14.25□□□□□ -0.13
SCARB1-207ENST00000541661 UBQLN1Q9UMX0 589 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms