RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PBX2P40425 430 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 DPY19L2P1Q6NXN4 242 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 DCLRE1AQ6PJP8 1040 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 KCNT2Q6UVM3 1135 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 BCL7CQ8WUZ0 217 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-202ENST00000538838 TAF4BQ92750 862 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 TATDN2Q93075 761 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 ZNF558Q96NG5 402 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 NT5C1BQ96P26 610 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 VRTNQ9H8Y1 702 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 FAM207AQ9NSI2 230 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-202ENST00000538838 PLXNA4Q9HCM2 1894 aa25.25■■□□□ 1.63
TMEM260-202ENST00000538838 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-202ENST00000538838 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-202ENST00000538838 LINC01553A4QN01 128 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 TMEM189-UBE2V1I3L0A0 370 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 ADCY5O95622 1261 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 CA3P07451 260 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 BRCC3P46736 316 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 ALDH7A1P49419 539 aaKnown RBP25.24■■□□□ 1.63
TMEM260-202ENST00000538838 WDR72Q3MJ13 1102 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 ZNF667Q5HYK9 610 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 GJB7Q6PEY0 223 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 SCARA5Q6ZMJ2 495 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 MRFAP1L1Q96HT8 127 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 NXF1Q9UBU9 619 aaKnown RBP25.24■■□□□ 1.63
TMEM260-202ENST00000538838 YBX2Q9Y2T7 364 aaKnown RBP25.24■■□□□ 1.63
TMEM260-202ENST00000538838 PCDHA11Q9Y5I1 949 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 VWA8A3KMH1 1905 aa25.24■■□□□ 1.63
TMEM260-202ENST00000538838 CHD9Q3L8U1 2897 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 KPNA7A9QM74 516 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 I3L4J1 428 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 EPHB6O15197 1021 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 PHLDB3Q6NSJ2 640 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 CLP1Q92989 425 aaKnown RBP25.23■■□□□ 1.63
TMEM260-202ENST00000538838 COLEC11Q9BWP8 271 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 PBX4Q9BYU1 374 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 GANQ9H2C0 597 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 APEX2Q9UBZ4 518 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 ADAM28Q9UKQ2 775 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 SNX9Q9Y5X1 595 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 AARSP49588 968 aaKnown RBP eCLIP25.23■■□□□ 1.63
TMEM260-202ENST00000538838 TIGD5Q53EQ6 642 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 SPRED2Q7Z698 418 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 VSTM4Q8IW00 320 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 PPM1KQ8N3J5 372 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 ARID3AQ99856 593 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 NIF3L1Q9GZT8 377 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 PLCB1Q9NQ66 1216 aa25.23■■□□□ 1.63
TMEM260-202ENST00000538838 AJAP1Q9UKB5 411 aaPredicted RBP25.23■■□□□ 1.63
TMEM260-202ENST00000538838 TADA2AO75478 443 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 NOL4O94818 638 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 ASPAP45381 313 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 TNNC1P63316 161 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 KLHDC7AQ5VTJ3 777 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 RRAGAQ7L523 313 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 SLC39A11Q8N1S5 342 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 NEK11Q8NG66 645 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 KAT5Q92993 513 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 FHOD1Q9Y613 1164 aa25.22■■□□□ 1.63
TMEM260-202ENST00000538838 DSTYKQ6XUX3 929 aa25.21■■□□□ 1.63
TMEM260-202ENST00000538838 SMYD3Q9H7B4 428 aa25.21■■□□□ 1.63
TMEM260-202ENST00000538838 AAASQ9NRG9 546 aa25.21■■□□□ 1.63
TMEM260-202ENST00000538838 GDAP2Q9NXN4 497 aa25.21■■□□□ 1.63
TMEM260-202ENST00000538838 ITIH6Q6UXX5 1313 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 RAP1GAPP47736 663 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 IGSF21Q96ID5 467 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 SENP8Q96LD8 212 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 MMS19Q96T76 1030 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 UBE2TQ9NPD8 197 aaPredicted RBP25.2■■□□□ 1.62
TMEM260-202ENST00000538838 PCDHB12Q9Y5F1 795 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 LAMA3Q16787 3333 aa25.2■■□□□ 1.62
TMEM260-202ENST00000538838 UCHL3P15374 230 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 TRIM21P19474 475 aaKnown RBP25.19■■□□□ 1.62
TMEM260-202ENST00000538838 CTNNB1P35222 781 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 CUL2Q13617 745 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 SPECC1LQ69YQ0 1117 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 IQCEQ6IPM2 695 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 FUT10Q6P4F1 479 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 TMC6Q7Z403 805 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 SUSD3Q96L08 255 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 KREMEN1Q96MU8 473 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 C17orf80Q9BSJ5 609 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 BCO2Q9BYV7 579 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 GPR62Q9BZJ7 368 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 NKX2-4Q9H2Z4 354 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 SPG21Q9NZD8 308 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 SF3B1O75533 1304 aaKnown RBP eCLIP25.19■■□□□ 1.629e-6■■■■■ 68.9
TMEM260-202ENST00000538838 CYB561D2O14569 222 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 P4HA1P13674 534 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 POLR2FP61218 127 aaKnown RBP25.19■■□□□ 1.62
TMEM260-202ENST00000538838 RAB30Q15771 203 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 VN1R3Q9BXE9 311 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 SDCBP2Q9H190 292 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 MSRAQ9UJ68 235 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 DNAJC12Q9UKB3 198 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 MTUS1Q9ULD2 1270 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 L1RE1Q9UN81 338 aa25.19■■□□□ 1.62
TMEM260-202ENST00000538838 CARNS1A5YM72 827 aa25.18■■□□□ 1.62
TMEM260-202ENST00000538838 M0QZQ0 153 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms