RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SEMA4AQ9H3S1 761 aa14.25□□□□□ -0.13
RTN3-207ENST00000536011 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
RTN3-207ENST00000536011 ASAH2Q9NR71 780 aa14.25□□□□□ -0.13
RTN3-207ENST00000536011 DOCK6Q96HP0 2047 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 KANSL1LA0AUZ9 987 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 ADRB2P07550 413 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 CEBPBP17676 345 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 GAP43P17677 238 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 TYMPP19971 482 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 POU5F1Q01860 360 aaKnown RBP14.24□□□□□ -0.13
RTN3-207ENST00000536011 GRIN1Q05586 938 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 TWF1Q12792 350 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 TMEM132DQ14C87 1099 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 SLC5A9Q2M3M2 681 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 SLC44A4Q53GD3 710 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 SPECC1Q5M775 1068 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 SPATA1Q5VX52 437 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 ADALQ6DHV7 355 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 ST13P5Q8NFI4 369 aaPredicted RBP14.24□□□□□ -0.13
RTN3-207ENST00000536011 MCRS1Q96EZ8 462 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
RTN3-207ENST00000536011 RPP25Q9BUL9 199 aaKnown RBP14.24□□□□□ -0.13
RTN3-207ENST00000536011 BCO2Q9BYV7 579 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 OSBPL6Q9BZF3 934 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 ASB7Q9H672 318 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 CPSF3Q9UKF6 684 aaKnown RBP14.24□□□□□ -0.13
RTN3-207ENST00000536011 EXOC7Q9UPT5 735 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 C2CD2Q9Y426 696 aa14.24□□□□□ -0.13
RTN3-207ENST00000536011 SRPRBQ9Y5M8 271 aaKnown RBP14.24□□□□□ -0.13
RTN3-207ENST00000536011 SEC24AO95486 1093 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 DCNP07585 359 aaKnown RBP14.23□□□□□ -0.13
RTN3-207ENST00000536011 EPHB3P54753 998 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 SNW1Q13573 536 aaKnown RBP14.23□□□□□ -0.13
RTN3-207ENST00000536011 MYBPC2Q14324 1141 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 POSTNQ15063 836 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 PRSS36Q5K4E3 855 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 RRAGBQ5VZM2 374 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 OVOS1Q6IE37 1185 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 JADE1Q6IE81 842 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 ARMCX5Q6P1M9 558 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 CCDC73Q6ZRK6 1079 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 ASCL5Q7RTU5 278 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 LRRC15Q8TF66 581 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 DNASE1L2Q92874 299 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 EPSTI1Q96J88 318 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 NELL2Q99435 816 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 GPR88Q9GZN0 384 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 ZFP14Q9HCL3 533 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
RTN3-207ENST00000536011 AGO2Q9UKV8 859 aaKnown RBP14.23□□□□□ -0.13
RTN3-207ENST00000536011 DSEQ9UL01 958 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 MRPS17Q9Y2R5 130 aaKnown RBP14.23□□□□□ -0.13
RTN3-207ENST00000536011 CLIC4Q9Y696 253 aa14.23□□□□□ -0.13
RTN3-207ENST00000536011 RIF1Q5UIP0 2472 aaKnown RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 WDR87Q6ZQQ6 2873 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 NCAM2O15394 837 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 FGF19O95750 216 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 SYT1P21579 422 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 NMT1P30419 496 aaKnown RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 ALDH1A3P47895 512 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 EPHA5P54756 1037 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 LILRA4P59901 499 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 GPR17Q13304 367 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 ALCAMQ13740 583 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 UBXN2BQ14CS0 331 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 PTPAQ15257 358 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 ZBTB41Q5SVQ8 909 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 RNF19BQ6ZMZ0 732 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 C1orf210Q8IVY1 113 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 SMARCD2Q92925 531 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 E2F7Q96AV8 911 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 FIZ1Q96SL8 496 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 DDX23Q9BUQ8 820 aaKnown RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 FOXQ1Q9C009 403 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 MRPL44Q9H9J2 332 aaKnown RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 HSFX1Q9UBD0 423 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 FBXO2Q9UK22 296 aaPredicted RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 YIPF1Q9Y548 306 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 ASB3Q9Y575 518 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 TIMM13Q9Y5L4 95 aaPredicted RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 MORC2Q9Y6X9 1032 aaPredicted RBP14.22□□□□□ -0.13
RTN3-207ENST00000536011 NOTCH4Q99466 2003 aa14.22□□□□□ -0.13
RTN3-207ENST00000536011 GABBR2O75899 941 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 IL18RAPO95256 599 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 NFICP08651 508 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 MYL4P12829 197 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 ACOT2P49753 483 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 RESTQ13127 1097 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 ZC2HC1CQ53FD0 456 aaPredicted RBP14.21□□□□□ -0.13
RTN3-207ENST00000536011 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 C9orf57Q5W0N0 161 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 SLC39A4Q6P5W5 647 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 ZNF852Q6ZMS4 543 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 TPRG1Q6ZUI0 275 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 DYMQ7RTS9 669 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 ZNF720Q7Z2F6 126 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 METTL23Q86XA0 190 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 SFR1Q86XK3 245 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms