RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ARHGEF3Q9NR81 526 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 FRMPD4Q14CM0 1322 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 SPATA31A5Q5VU36 1347 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 SPATA31A7Q8IWB4 1347 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 DPPA5A6NC42 116 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 F5H423 210 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-232ENST00000535094 MAP3K6O95382 1288 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 ENO1P06733 434 aaKnown RBP16.8■□□□□ 0.28
MCF2L-232ENST00000535094 BSPRYQ5W0U4 402 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 ZC3H3Q8IXZ2 948 aaKnown RBP16.8■□□□□ 0.28
MCF2L-232ENST00000535094 FAM71AQ8IYT1 594 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 GLIS1Q8NBF1 620 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 SMYD3Q9H7B4 428 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 MRPL47Q9HD33 250 aaKnown RBP16.8■□□□□ 0.28
MCF2L-232ENST00000535094 CHMP2BQ9UQN3 213 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 PLCH1Q4KWH8 1693 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
MCF2L-232ENST00000535094 CIB2O75838 187 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 OSTNP61366 133 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 EFTUD2Q15029 972 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■■■□□ 18
MCF2L-232ENST00000535094 HIF1AQ16665 826 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 NLRX1Q86UT6 975 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 OGFOD1Q8N543 542 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 MCEEQ96PE7 176 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 DDX50Q9BQ39 737 aaKnown RBP16.8■□□□□ 0.28
MCF2L-232ENST00000535094 SLC5A4Q9NY91 659 aa16.8■□□□□ 0.28
MCF2L-232ENST00000535094 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-232ENST00000535094 FSCN2O14926 492 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 OPHN1O60890 802 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 KRT19P08727 400 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 PHBP35232 272 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 NFX1Q12986 1120 aaKnown RBP16.79■□□□□ 0.28
MCF2L-232ENST00000535094 TFDP1Q14186 410 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 ISLR2Q6UXK2 745 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 LRRC6Q86X45 466 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 VTI1AQ96AJ9 217 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 TJP3O95049 919 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 RARRES1P49788 294 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 MGAT5Q09328 741 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 AOC3Q16853 763 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 RC3H1Q5TC82 1133 aaKnown RBP16.79■□□□□ 0.28
MCF2L-232ENST00000535094 MCOLN2Q8IZK6 566 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 DAW1Q8N136 415 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 FBXO41Q8TF61 875 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 FBXO6Q9NRD1 293 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-232ENST00000535094 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-232ENST00000535094 DOCK2Q92608 1830 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 I3L4J1 428 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 THOC5Q13769 683 aaKnown RBP16.79■□□□□ 0.28
MCF2L-232ENST00000535094 JDP2Q8WYK2 163 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 FAM111AQ96PZ2 611 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 CRAMP1Q96RY5 1269 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 SHCBP1LQ9BZQ2 653 aa16.79■□□□□ 0.28
MCF2L-232ENST00000535094 KRT36O76013 467 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 LMNB2Q03252 620 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 MFSD7Q6UXD7 560 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 SLC25A41Q8N5S1 370 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 CCDC124Q96CT7 223 aaKnown RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 MAD1L1Q9Y6D9 718 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 NFIBO00712 420 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 MAP3K7O43318 606 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 LPXNO60711 386 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 RAD17O75943 681 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 ATP4AP20648 1035 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 KCNA3P22001 575 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 PTK6Q13882 451 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 KPNB1Q14974 876 aaKnown RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 CLEC16AQ2KHT3 1053 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 CYP4A22Q5TCH4 519 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 RFX6Q8HWS3 928 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 PPM1NQ8N819 430 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 HSPH1Q92598 858 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 ZNF75CPQ92670 426 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 TSSK1BQ9BXA7 367 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 MAK16Q9BXY0 300 aaKnown RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 DENND2DQ9H6A0 471 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 TMEM8AQ9HCN3 771 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
MCF2L-232ENST00000535094 MYH11P35749 1972 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 H3BRJ5 948 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 PIK3R2O00459 728 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 PGM1P36871 562 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 SNX30Q5VWJ9 437 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 RFWD3Q6PCD5 774 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 IL31RAQ8NI17 732 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 TCP10LQ8TDR4 215 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
MCF2L-232ENST00000535094 SERPINB3P29508 390 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 TMPRSS15P98073 1019 aa16.77■□□□□ 0.28
MCF2L-232ENST00000535094 SHC3Q92529 594 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms