RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ADAM2Q99965 735 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TSGA10Q9BZW7 698 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 VRTNQ9H8Y1 702 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 LUC7LQ9NQ29 371 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 CISHQ9NSE2 258 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 TAS2R14Q9NYV8 317 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 SALL4Q9UJQ4 1053 aa21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 UBQLN1Q9UMX0 589 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 R3HCC1Q9Y3T6 440 aaKnown RBP21.77■■□□□ 1.08
TNFRSF1A-205ENST00000534885 PTGESO14684 152 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 PQBP1O60828 265 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 FMO1Q01740 532 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 KIF18AQ8NI77 898 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 PCDHB18PQ96TA0 734 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SEZ6LQ9BYH1 1024 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 BCO2Q9BYV7 579 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TFRCP02786 760 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TUBB4AP04350 444 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ITGA4P13612 1032 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MLH1P40692 756 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CDR2Q01850 454 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SOX4Q06945 474 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 C10orf76Q5T2E6 689 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TRAIPQ9BWF2 469 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SDCBP2Q9H190 292 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SMYD3Q9H7B4 428 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GOLGA2P5Q9HBQ8 144 aa21.76■■□□□ 1.07
TNFRSF1A-205ENST00000534885 IBSPP21815 317 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 AFF1P51825 1210 aaKnown RBP21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ZNF132P52740 706 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CDH8P55286 799 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ZNF394Q53GI3 561 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 AGMOQ6ZNB7 445 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 LRRC8DQ7L1W4 858 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SLC35F6Q8N357 371 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MYH10P35580 1976 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SELPP16109 830 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ATF7P17544 494 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 C9orf57Q5W0N0 161 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GSTCDQ8NEC7 633 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GAD1Q99259 594 aa21.75■■□□□ 1.07
TNFRSF1A-205ENST00000534885 A0A0U1RQF3 1178 aa21.74■■□□□ 1.07
TNFRSF1A-205ENST00000534885 STAU1O95793 577 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MRPL10Q7Z7H8 261 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1A-205ENST00000534885 HACE1Q8IYU2 909 aa21.74■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TXLNBQ8N3L3 684 aa21.74■■□□□ 1.07
TNFRSF1A-205ENST00000534885 DIS3LQ8TF46 1054 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ANO9A1A5B4 782 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ZNF623O75123 536 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GNA15P30679 374 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 RAB27AP51159 221 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 BPIFB4P59827 614 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SLC39A5Q6ZMH5 540 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 RNF169Q8NCN4 708 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SECISBP2LQ93073 1101 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ARMC5Q96C12 935 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 FAXDC2Q96IV6 333 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 PPP1R10Q96QC0 940 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TSPAN18Q96SJ8 248 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MYO1AQ9UBC5 1043 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CAPN6Q9Y6Q1 641 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 KIAA0100Q14667 2235 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 H2AFZP0C0S5 128 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GALCP54803 685 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MYO1EQ12965 1108 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 H2AFVQ71UI9 128 aa21.73■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ARL5CA6NH57 179 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TLR3O15455 904 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 XPOTO43592 962 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 BUB1O43683 1085 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MOCS3O95396 460 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CFHP08603 1231 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CASQ1P31415 396 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 BFSP2Q13515 415 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GPNMBQ14956 572 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 RTN4RL1Q86UN2 441 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 LRRC52Q8N7C0 313 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MMS19Q96T76 1030 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 MIOSQ9NXC5 875 aa21.72■■□□□ 1.07
TNFRSF1A-205ENST00000534885 PIRO00625 290 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 HSPA1AP0DMV8 641 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 HSPA1BP0DMV9 641 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 P4HA1P13674 534 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ABCB4P21439 1286 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SSTR3P32745 418 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TNNC1P63316 161 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 TET1Q8NFU7 2136 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 HMGXB4Q9UGU5 601 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 GIT1Q9Y2X7 761 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 NBNO60934 754 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CYP3A5P20815 502 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ZNF677Q86XU0 584 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 LINC01599Q8WXQ3 324 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 RPS6KC1Q96S38 1066 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ISCUQ9H1K1 167 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 CACNG4Q9UBN1 327 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 PUF60Q9UHX1 559 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 SNX9Q9Y5X1 595 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 ATP8B3O60423 1300 aa21.71■■□□□ 1.07
TNFRSF1A-205ENST00000534885 PITPNM1O00562 1244 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms