RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 GJB7Q6PEY0 223 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 RRAGAQ7L523 313 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 NEK11Q8NG66 645 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 TAF4BQ92750 862 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 AAASQ9NRG9 546 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 POLIQ9UNA4 740 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 PTPRSQ13332 1948 aa18.96■□□□□ 0.63
CTSB-222ENST00000531551 COL4A6Q14031 1691 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 A0A1W2PQC6 194 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 CA3P07451 260 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 PHLDB3Q6NSJ2 640 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 TMEM173Q86WV6 379 aaPredicted RBP18.95■□□□□ 0.62
CTSB-222ENST00000531551 ARHGEF19Q8IW93 802 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 COLGALT1Q8NBJ5 622 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 SP7Q8TDD2 431 aaPredicted RBP18.95■□□□□ 0.62
CTSB-222ENST00000531551 APEX2Q9UBZ4 518 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 LAMA3Q16787 3333 aa18.95■□□□□ 0.62
CTSB-222ENST00000531551 FNDC1Q4ZHG4 1894 aaPredicted RBP18.95■□□□□ 0.62
CTSB-222ENST00000531551 TRIM21P19474 475 aaKnown RBP18.94■□□□□ 0.62
CTSB-222ENST00000531551 DRC7Q8IY82 874 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 MRFAP1L1Q96HT8 127 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 PBX4Q9BYU1 374 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 UBE2TQ9NPD8 197 aaPredicted RBP18.94■□□□□ 0.62
CTSB-222ENST00000531551 MARCH5Q9NX47 278 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 ADAM28Q9UKQ2 775 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 MTUS1Q9ULD2 1270 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 PCDHB12Q9Y5F1 795 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 PCDHA11Q9Y5I1 949 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 TDRD15B5MCY1 1934 aaKnown RBP18.94■□□□□ 0.62
CTSB-222ENST00000531551 P4HA1P13674 534 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 TIGD5Q53EQ6 642 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 KLHDC7AQ5VTJ3 777 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 TMC6Q7Z403 805 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 SIX2Q9NPC8 291 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 MSRAQ9UJ68 235 aa18.94■□□□□ 0.62
CTSB-222ENST00000531551 YBX2Q9Y2T7 364 aaKnown RBP18.94■□□□□ 0.62
CTSB-222ENST00000531551 LINC01553A4QN01 128 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 CYB561D2O14569 222 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 EPHB6O15197 1021 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 STAU1O95793 577 aaKnown RBP18.93■□□□□ 0.62
CTSB-222ENST00000531551 PBX1P40424 430 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 ARHGAP44Q17R89 818 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 CD300LGQ6UXG3 332 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 VSTM4Q8IW00 320 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 ANP32BQ92688 251 aaKnown RBP18.93■□□□□ 0.62
CTSB-222ENST00000531551 KAT5Q92993 513 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 TMEM169Q96HH4 297 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 SENP8Q96LD8 212 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 NIF3L1Q9GZT8 377 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 VRTNQ9H8Y1 702 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 DNAJC12Q9UKB3 198 aa18.93■□□□□ 0.62
CTSB-222ENST00000531551 TIMM13Q9Y5L4 95 aaPredicted RBP18.93■□□□□ 0.62
CTSB-222ENST00000531551 PDCD11Q14690 1871 aaKnown RBP18.93■□□□□ 0.62
CTSB-222ENST00000531551 HUS1O60921 280 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 ARHGEF15O94989 841 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CTNNB1P35222 781 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 RAP1GAPP47736 663 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 POLR2FP61218 127 aaKnown RBP18.92■□□□□ 0.62
CTSB-222ENST00000531551 RAPGEF1Q13905 1077 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 SPECC1LQ69YQ0 1117 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
CTSB-222ENST00000531551 CPLX3Q8WVH0 158 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 IGSF21Q96ID5 467 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 ARID3AQ99856 593 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 SMYD3Q9H7B4 428 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 NLRC4Q9NPP4 1024 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 PLCB1Q9NQ66 1216 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 SPG21Q9NZD8 308 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 FHOD1Q9Y613 1164 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 TMEM189-UBE2V1I3L0A0 370 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 TRAPPC3O43617 180 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 WEE2P0C1S8 567 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 UCHL3P15374 230 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CD58P19256 250 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CDH8P55286 799 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CUL2Q13617 745 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 IQCEQ6IPM2 695 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 FUT10Q6P4F1 479 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CACNA2D4Q7Z3S7 1137 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CEP57Q86XR8 500 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 SLC39A11Q8N1S5 342 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 CLP1Q92989 425 aaKnown RBP18.92■□□□□ 0.62
CTSB-222ENST00000531551 C17orf80Q9BSJ5 609 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 NKX2-4Q9H2Z4 354 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 PRO3102Q9H379 93 aa18.92■□□□□ 0.62
CTSB-222ENST00000531551 NOL4O94818 638 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 LINC00271P0C7V0 271 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 ASPAP45381 313 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 MFAP3P55082 362 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 RAB30Q15771 203 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 DPY19L2P1Q6NXN4 242 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 SPRED2Q7Z698 418 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 SPC24Q8NBT2 197 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 APPL2Q8NEU8 664 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 GPR62Q9BZJ7 368 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 GANQ9H2C0 597 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 GDAP2Q9NXN4 497 aa18.91■□□□□ 0.62
CTSB-222ENST00000531551 AJAP1Q9UKB5 411 aaPredicted RBP18.91■□□□□ 0.62
CTSB-222ENST00000531551 SF3B1O75533 1304 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■■■■ 91.3
CTSB-222ENST00000531551 ODC1P11926 461 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms