RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 AKR1A1P14550 325 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 PDCP20941 246 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 UBA1P22314 1058 aaKnown RBP9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 CYP3A7P24462 503 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 NKX3-2P78367 333 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 SP2Q02086 613 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 RESTQ13127 1097 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 SAFBQ15424 915 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 VMACQ2NL98 169 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 DUSP28Q4G0W2 176 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 CEP55Q53EZ4 464 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 GJC2Q5T442 439 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 ZC3H14Q6PJT7 736 aaKnown RBP9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 MOXD1Q6UVY6 613 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 NIPA1Q7RTP0 329 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 NOSTRINQ8IVI9 506 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 ZDHHC14Q8IZN3 488 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 SCFD2Q8WU76 684 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 GPRASP2Q96D09 838 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 MXRA8Q9BRK3 442 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 GFOD1Q9NXC2 390 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 DDX41Q9UJV9 622 aaKnown RBP9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 FAM184BQ9ULE4 1060 aa9.89□□□□□ -0.83
CCDC90B-217ENST00000530253 FIBPO43427 364 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 SLC37A4O43826 429 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 ATP9AO75110 1047 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 GSNP06396 782 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 GJB1P08034 283 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 ARP10275 920 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 VAV1P15498 845 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 KCNA2P16389 499 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 MAPKAPK2P49137 400 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 ZNF165P49910 485 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 ARHGAP1Q07960 439 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 PKP1Q13835 747 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 Q4G0T1 1027 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 ANO1Q5XXA6 986 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 IQSEC1Q6DN90 963 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 RPTNQ6XPR3 784 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 SEPT14Q6ZU15 432 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 NEK8Q86SG6 692 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 COPS5Q92905 334 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 UPF3AQ9H1J1 476 aaKnown RBP9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 BCAS3Q9H6U6 928 aa9.88□□□□□ -0.83
CCDC90B-217ENST00000530253 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 VPS37CA5D8V6 355 aaPredicted RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 MYADML2A6NDP7 307 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 MEIS3P2A8K0S8 358 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 H3BQV1 296 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 TNFRSF10CO14798 259 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 STX6O43752 255 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 MSCO60682 206 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 DUSP11O75319 330 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 TXNP10599 105 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 TGFB3P10600 412 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 NME1P15531 152 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 GJA9P57773 515 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 TNFAIP2Q03169 654 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 ITGB3BPQ13352 177 aaPredicted RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 MTMR1Q13613 665 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 AUHQ13825 339 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 TARBP2Q15633 366 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 LY6KQ17RY6 165 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 GNPTABQ3T906 1256 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 PPP4R3AQ6IN85 833 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 PLA2G4DQ86XP0 818 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 NAT16Q8N8M0 369 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 U2AF1L4Q8WU68 220 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 DHRS1Q96LJ7 313 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 SLC6A18Q96N87 628 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 DEFB118Q96PH6 123 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 AGO4Q9HCK5 861 aaKnown RBP9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 KCNH7Q9NS40 1196 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 IMPACTQ9P2X3 320 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 OGDHLQ9ULD0 1010 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 TELO2Q9Y4R8 837 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 MRVI1Q9Y6F6 885 aa9.87□□□□□ -0.83
CCDC90B-217ENST00000530253 NKRFO15226 690 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 MSH4O15457 936 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 MAFGO15525 162 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 GGPS1O95749 300 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 HSP90AA1P07900 732 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 RARBP10826 455 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 GCFC2P16383 781 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 CST5P28325 142 aaPredicted RBP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 CNGA1P29973 690 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 ANP32AP39687 249 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 CTSKP43235 329 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 GJA8P48165 433 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 SETQ01105 290 aaPredicted RBP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 KIR3DS1Q14943 382 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 PLEKHN1Q494U1 663 aaPredicted RBP9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 SPATS1Q496A3 300 aa9.86□□□□□ -0.83
CCDC90B-217ENST00000530253 PRR16Q569H4 304 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms