RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 HPDLQ96IR7 371 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 CAPZA3Q96KX2 299 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 GLT1D1Q96MS3 346 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 RPS6KC1Q96S38 1066 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 BEGAINQ9BUH8 593 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 APOBEC3GQ9HC16 384 aaKnown RBP10.65□□□□□ -0.7
VPS13B-212ENST00000524330 CISHQ9NSE2 258 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 SLC38A7Q9NVC3 462 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.7
VPS13B-212ENST00000524330 STRIP2Q9ULQ0 834 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 AGAP1Q9UPQ3 857 aa10.65□□□□□ -0.7
VPS13B-212ENST00000524330 ADAMTS4O75173 837 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CSDE1O75534 798 aaKnown RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CAPN15O75808 1086 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 FTCDO95954 541 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CST3P01034 146 aaPredicted RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CYP1A2P05177 515 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 ASGR1P07306 291 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 HSPA6P17066 643 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 DESP17661 470 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CHRNB2P17787 502 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CYP3A5P20815 502 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 PAX3P23760 479 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CETN2P41208 172 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 SLC1A1P43005 524 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 WNT7BP56706 349 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CENPCQ03188 943 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 C1QBPQ07021 282 aaKnown RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 PTK7Q13308 1070 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 BRD3Q15059 726 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 KCNA10Q16322 511 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 WDR72Q3MJ13 1102 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 RSRC2Q7L4I2 434 aaKnown RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 SERINC5Q86VE9 423 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CEP120Q8N960 986 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 C1orf127Q8N9H9 656 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 ZNF564Q8TBZ8 553 aaPredicted RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CD99L2Q8TCZ2 262 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 ANKRD7Q92527 254 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 SNX27Q96L92 541 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 BCO2Q9BYV7 579 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 THAP2Q9H0W7 228 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 SNTG2Q9NY99 539 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CNOT8Q9UFF9 292 aaKnown RBP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 PARP2Q9UGN5 583 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS13B-212ENST00000524330 CDY2AQ9Y6F7 541 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 SQORQ9Y6N5 450 aa10.64□□□□□ -0.71
VPS13B-212ENST00000524330 GOLGA6L10A0A0M3HER8 536 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 TARSL2A2RTX5 802 aaKnown RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 KCNK3O14649 394 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 FANCGO15287 622 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 CYP1A1P04798 512 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 FAM163BP0C2L3 166 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 VDRP11473 427 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 UNGP13051 313 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 KCNE1P15382 129 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 CD19P15391 556 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 CD58P19256 250 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 FGFR4P22455 802 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 HOXA11P31270 313 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 ZNF132P52740 706 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 PTGISQ16647 500 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 MAP3K21Q5TCX8 1036 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 SEL1L2Q5TEA6 688 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 ZNF572Q7Z3I7 529 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 PHF13Q86YI8 300 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 MCOLN2Q8IZK6 566 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 UBR7Q8N806 425 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 MAIP1Q8WWC4 291 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 ZNF606Q8WXB4 792 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 DDX1Q92499 740 aaKnown RBP10.63□□□□□ -0.71
VPS13B-212ENST00000524330 PGBD4Q96DM1 585 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 MMS19Q96T76 1030 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 PCDHB18PQ96TA0 734 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 NUP85Q9BW27 656 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 TLR10Q9BXR5 811 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 UBN1Q9NPG3 1134 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 PARVAQ9NVD7 372 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 ADAM22Q9P0K1 906 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 CNTN3Q9P232 1028 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 WDR35Q9P2L0 1181 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 SALL4Q9UJQ4 1053 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 PCDHGC3Q9UN70 934 aa10.63□□□□□ -0.71
VPS13B-212ENST00000524330 CITO14578 2027 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 RALGAPA2Q2PPJ7 1873 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 ARHGEF37A1IGU5 675 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 CCDC66A2RUB6 948 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 MYADML2A6NDP7 307 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 KBTBD13C9JR72 458 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 CCDC188H7C350 402 aa10.62□□□□□ -0.71
VPS13B-212ENST00000524330 MYO1FO00160 1098 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms