RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 NUB1Q9Y5A7 615 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 TIMM13Q9Y5L4 95 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 VCANP13611 3396 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 SPTLC1O15269 473 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 STX10O60499 249 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 WEE2P0C1S8 567 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
PABPC1-219ENST00000522387 CD58P19256 250 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 CDH8P55286 799 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 ARID5AQ03989 594 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 ORC1Q13415 861 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
PABPC1-219ENST00000522387 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 SPECC1LQ69YQ0 1117 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 SPRED2Q7Z698 418 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 TMEM173Q86WV6 379 aaPredicted RBP13.29□□□□□ -0.28
PABPC1-219ENST00000522387 CD302Q8IX05 232 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 EHBP1Q8NDI1 1231 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 ELAC1Q9H777 363 aaKnown RBP13.29□□□□□ -0.28
PABPC1-219ENST00000522387 KCND1Q9NSA2 647 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 IMPACTQ9P2X3 320 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 FHOD1Q9Y613 1164 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 PODXLO00592 558 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 NOL4O94818 638 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 CALCAP01258 141 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 CASP14P31944 242 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 USP8P40818 1118 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
PABPC1-219ENST00000522387 GRIK3Q13003 919 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 KIF18AQ8NI77 898 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 IMPG2Q9BZV3 1241 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 NRDE2Q9H7Z3 1164 aa13.29□□□□□ -0.28
PABPC1-219ENST00000522387 TRIOBPQ9H2D6 2365 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 TLL1O43897 1013 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 GJB5O95377 273 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 GTF2H1P32780 548 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 PBX1P40424 430 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 BRCC3P46736 316 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 UPP1Q16831 310 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 WDR44Q5JSH3 913 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 E4F1Q66K89 784 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 ZNF397Q8NF99 534 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 NEK11Q8NG66 645 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 B3GALT6Q96L58 329 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 ERGIC2Q96RQ1 377 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 XYLT2Q9H1B5 865 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 SIX2Q9NPC8 291 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 ACP6Q9NPH0 428 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 V9GYY5 206 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 MYO7AQ13402 2215 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 KIF2AO00139 706 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 N4BP1O75113 896 aaKnown RBP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 KIF4AO95239 1232 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 GYPCP04921 128 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 UCHL3P15374 230 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 LILRA4P59901 499 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 RBP5P82980 135 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 TUSC3Q13454 348 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 KLHDC7AQ5VTJ3 777 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 ITGA11Q9UKX5 1188 aa13.28□□□□□ -0.28
PABPC1-219ENST00000522387 FNDC1Q4ZHG4 1894 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-219ENST00000522387 NRP1O14786 923 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 XPOTO43592 962 aaKnown RBP13.27□□□□□ -0.28
PABPC1-219ENST00000522387 HCRTO43612 131 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 IQCEQ6IPM2 695 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 HERVK_113Q902F9 699 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 NT5C1BQ96P26 610 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 SMYD3Q9H7B4 428 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 APEX2Q9UBZ4 518 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 DNAJC12Q9UKB3 198 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 COQ4Q9Y3A0 265 aa13.27□□□□□ -0.28
PABPC1-219ENST00000522387 PDCD11Q14690 1871 aaKnown RBP13.27□□□□□ -0.29
PABPC1-219ENST00000522387 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 AP3M2P53677 418 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 CEP57Q86XR8 500 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 HERC6Q8IVU3 1022 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 CERS4Q9HA82 394 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 DERAQ9Y315 318 aa13.27□□□□□ -0.29
PABPC1-219ENST00000522387 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
PABPC1-219ENST00000522387 KPNA7A9QM74 516 aa13.26□□□□□ -0.29
PABPC1-219ENST00000522387 PIRO00625 290 aa13.26□□□□□ -0.29
PABPC1-219ENST00000522387 EFCAB14O75071 495 aa13.26□□□□□ -0.29
PABPC1-219ENST00000522387 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
PABPC1-219ENST00000522387 ASS1P00966 412 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms