RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RARAP10276 462 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 AARSP49588 968 aaKnown RBP eCLIP10.77□□□□□ -0.69
MCF2-209ENST00000520602 MNAT1P51948 309 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ATP11AP98196 1134 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 NFX1Q12986 1120 aaKnown RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 GPS1Q13098 491 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 DRP2Q13474 957 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 TMED2Q15363 201 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 PPP6R3Q5H9R7 873 aaPredicted RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 FAM102AQ5T9C2 384 aaPredicted RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 C11orf63Q6NUN7 778 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 AFG1LQ8WV93 481 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 CPB2Q96IY4 423 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 FDXACB1Q9BRP7 624 aaPredicted RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 TRIM7Q9C029 511 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 ADGRA3Q8IWK6 1321 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MYH7BA7E2Y1 1941 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 NFASCO94856 1347 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ZNF286BP0CG31 522 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 INSRRP14616 1297 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 RGS7P49802 495 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 CDH8P55286 799 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ADCY2Q08462 1091 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 LRRC14Q15048 493 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 KYNUQ16719 465 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 IZUMO3Q5VZ72 239 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 FOXR1Q6PIV2 292 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 GDAP1Q8TB36 358 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 UBA3Q8TBC4 463 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 CDCA5Q96FF9 252 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 BORCS6Q96GS4 357 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MFSD14AQ96MC6 490 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MIS12Q9H081 205 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 CES2O00748 559 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 EIF3HO15372 352 aaKnown RBP eCLIP10.77□□□□□ -0.69
MCF2-209ENST00000520602 GH1P01241 217 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MDH1P40925 334 aaKnown RBP10.77□□□□□ -0.69
MCF2-209ENST00000520602 TNFAIP2Q03169 654 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 LONRF1Q17RB8 773 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 BBS9Q3SYG4 887 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ZACNQ401N2 412 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 CEP128Q6ZU80 1094 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ABRAQ8N0Z2 381 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MDM1Q8TC05 714 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 HELQQ8TDG4 1101 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 SNF8Q96H20 258 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 ACAP3Q96P50 834 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 FERMT1Q9BQL6 677 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 SNX9Q9Y5X1 595 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 FAM169AQ9Y6X4 670 aa10.77□□□□□ -0.69
MCF2-209ENST00000520602 MAPK13O15264 365 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 PRPSAP2O60256 369 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 FARP2O94887 1054 aaPredicted RBP10.76□□□□□ -0.69
MCF2-209ENST00000520602 LSP1P33241 339 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 SYCP2LQ5T4T6 812 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 DARS2Q6PI48 645 aaKnown RBP10.76□□□□□ -0.69
MCF2-209ENST00000520602 CPNE8Q86YQ8 564 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 CCDC125Q86Z20 511 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 CEP120Q8N960 986 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 OR6J1Q8NGC5 347 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.76□□□□□ -0.69
MCF2-209ENST00000520602 PDGFCQ9NRA1 345 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 NOD1Q9Y239 953 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 ECM29Q5VYK3 1845 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 COL24A1Q17RW2 1714 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 RREB1Q92766 1687 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 EXOC1LA0A1B0GW35 172 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 CXCL11O14625 94 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 ARSEP51690 589 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 HIRAP54198 1017 aaPredicted RBP10.76□□□□□ -0.69
MCF2-209ENST00000520602 SNX16P57768 344 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 KCNT1Q5JUK3 1230 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 CASC4Q6P4E1 433 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 MPZL3Q6UWV2 235 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 PPM1EQ8WY54 764 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 MED10Q9BTT4 135 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 SEMA4AQ9H3S1 761 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 ST6GALNAC4Q9H4F1 302 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 ERVK-5Q9HDB9 667 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 STRIP2Q9ULQ0 834 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 HEY1Q9Y5J3 304 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 SNCAIPQ9Y6H5 919 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 NCANO14594 1321 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 TRIM66O15016 1216 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 FLT3P36888 993 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 HHATQ5VTY9 493 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 SRRM1Q8IYB3 904 aaKnown RBP10.76□□□□□ -0.69
MCF2-209ENST00000520602 C2orf69Q8N8R5 385 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 AP5M1Q9H0R1 490 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 RNF19AQ9NV58 838 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 PRMT7Q9NVM4 692 aaPredicted RBP10.76□□□□□ -0.69
MCF2-209ENST00000520602 ARHGAP28Q9P2N2 729 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 PRDM4Q9UKN5 801 aa10.76□□□□□ -0.69
MCF2-209ENST00000520602 EP400Q96L91 3159 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms