RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ERICH1Q86X53 443 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 CEP170P1Q96L14 293 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 RAD17O75943 681 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 ASMTLO95671 621 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 HLA-DRAP01903 254 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 SSR1P43307 286 aaKnown RBP17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 ACVR2BQ13705 512 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 TRABD2AQ86V40 505 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 UTP4Q969X6 686 aaKnown RBP17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 IFT74Q96LB3 600 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 PDCD2LQ9BRP1 358 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 SAYSD1Q9NPB0 183 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 ADAM22Q9P0K1 906 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 DNPEPQ9ULA0 475 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 GRID1Q9ULK0 1009 aa17.56■□□□□ 0.4
PCDHGA11-202ENST00000518882 TBC1D12O60347 775 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 UNC5CO95185 931 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 STBD1O95210 358 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 VNN1O95497 513 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 ETS1P14921 441 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 GARTP22102 1010 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 SFNP31947 248 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 KRT76Q01546 638 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 DNAJC3Q13217 504 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 RSBN1LQ6PCB5 846 aaPredicted RBP17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 ANKRD35Q8N283 1001 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 EXD1Q8NHP7 514 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 BICD1Q96G01 975 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 MYLK2Q9H1R3 596 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 SLCO1B3Q9NPD5 702 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 XPNPEP1Q9NQW7 623 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 PXMP2Q9NR77 195 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 GABBR1Q9UBS5 961 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 EXOC1LA0A1B0GW35 172 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 ABHD2P08910 425 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 IL9RQ01113 521 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 ZACNQ401N2 412 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 BRDTQ58F21 947 aaPredicted RBP17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 KAZNQ674X7 775 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 DENND1AQ8TEH3 1009 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 ZNF570Q96NI8 536 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 MOV10L1Q9BXT6 1211 aaKnown RBP17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 SLC38A10Q9HBR0 1119 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 APOBEC3GQ9HC16 384 aaKnown RBP17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 KIAA1586Q9HCI6 787 aa17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 NOP53Q9NZM5 478 aaKnown RBP17.55■□□□□ 0.4
PCDHGA11-202ENST00000518882 TLR3O15455 904 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 LIASO43766 372 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 DIAPH2O60879 1101 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 C4BPAP04003 597 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 TNNI1P19237 187 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 CCND1P24385 295 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 PIK3CAP42336 1068 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 NLRP11P59045 1033 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 CLDN10P78369 228 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 CCDC15Q0P6D6 951 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 PLEKHA7Q6IQ23 1121 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 GRAMD1AQ96CP6 724 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 RSRC1Q96IZ7 334 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 ETNK1Q9HBU6 452 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 POC1B-GALNT4F8VUJ3 575 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 ASNSP08243 561 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 GNA15P30679 374 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 SKIV2L2P42285 1042 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 ACOT2P49753 483 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 RPL7AP62424 266 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 PKN2Q16513 984 aaKnown RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 LIN9Q5TKA1 542 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 SCARA3Q6AZY7 606 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 TMEM270Q6UE05 265 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 CAPN12Q6ZSI9 719 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 KRT27Q7Z3Y8 459 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 ABRAQ8N0Z2 381 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 RIBC1Q8N443 379 aaPredicted RBP17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 GMLQ99445 158 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 ADAM33Q9BZ11 813 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 PHTF1Q9UMS5 762 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 CHKBQ9Y259 395 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 PCDHA10Q9Y5I2 948 aa17.54■□□□□ 0.4
PCDHGA11-202ENST00000518882 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 DNALI1O14645 258 aaPredicted RBP17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 PECAM1P16284 738 aaPredicted RBP17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 BPIFB4P59827 614 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 CRYMQ14894 314 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 NAA25Q14CX7 972 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 C4orf33Q8N1A6 199 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 CFAP57Q96MR6 1250 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 HAPLN2Q9GZV7 340 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms