RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
AP3B1-203ENST00000517940 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 POF1BQ8WVV4 589 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 AUTS2Q8WXX7 1259 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
AP3B1-203ENST00000517940 SAMD11Q96NU1 681 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 FAM193BQ96PV7 902 aaPredicted RBP12.74□□□□□ -0.37
AP3B1-203ENST00000517940 RTP3Q9BQQ7 232 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 HERC2P3Q9BVR0 1158 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.37
AP3B1-203ENST00000517940 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 AJAP1Q9UKB5 411 aaPredicted RBP12.74□□□□□ -0.37
AP3B1-203ENST00000517940 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
AP3B1-203ENST00000517940 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 XPOTO43592 962 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 HCRTO43612 131 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 RB1P06400 928 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 FGFR3P22607 806 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 PPM1AP35813 382 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 COPB1P53618 953 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 AP3M2P53677 418 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 RBP5P82980 135 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 MYL7Q01449 175 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 KCNMA1Q12791 1236 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 GPM6BQ13491 265 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 PTPN21Q16825 1174 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 TPD52L1Q16890 204 aaPredicted RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 KRT39Q6A163 491 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 OSTM1Q86WC4 334 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 CACTINQ8WUQ7 758 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 KBTBD7Q8WVZ9 684 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 SENP8Q96LD8 212 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 GUCD1Q96NT3 240 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 NAT10Q9H0A0 1025 aaKnown RBP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 PRDM12Q9H4Q4 367 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 SIX2Q9NPC8 291 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 RWDD3Q9Y3V2 267 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 NUB1Q9Y5A7 615 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 PCDHB12Q9Y5F1 795 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.73□□□□□ -0.37
AP3B1-203ENST00000517940 BRWD1Q9NSI6 2320 aa12.73□□□□□ -0.37
AP3B1-203ENST00000517940 PTPRDP23468 1912 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 SF3B1O75533 1304 aaKnown RBP eCLIP12.72□□□□□ -0.37
AP3B1-203ENST00000517940 ADAM12O43184 909 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 TBC1D4O60343 1298 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 CSPG5O95196 566 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 SOD2P04179 222 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 KRT19P08727 400 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 ASPAP45381 313 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 MTIF2P46199 727 aaKnown RBP12.72□□□□□ -0.37
AP3B1-203ENST00000517940 TAF6P49848 677 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 KLK7P49862 253 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 BIRC3Q13489 604 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 SOWAHAQ2M3V2 549 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 VWA3BQ502W6 1294 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 KIAA0319Q5VV43 1072 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 ARHGEF19Q8IW93 802 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 UBR7Q8N806 425 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 KAT5Q92993 513 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 TATDN2Q93075 761 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 TMEM169Q96HH4 297 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 HPDLQ96IR7 371 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 ARID3AQ99856 593 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 C11orf84Q9BUA3 381 aaPredicted RBP12.72□□□□□ -0.37
AP3B1-203ENST00000517940 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 SMYD3Q9H7B4 428 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
AP3B1-203ENST00000517940 TIMM13Q9Y5L4 95 aaPredicted RBP12.72□□□□□ -0.37
AP3B1-203ENST00000517940 SMTNL1A8MU46 457 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 LGALS16A8MUM7 142 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 HIDE1A8MVS5 230 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 KPNA7A9QM74 516 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 EPHB6O15197 1021 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 TEX33O43247 280 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 TADA2AO75478 443 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 CAVIN2O95810 425 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 CYP11A1P05108 521 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 CTSAP10619 480 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 SLC9A1P19634 815 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 PIK3CAP42336 1068 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 NOP14P78316 857 aaKnown RBP12.71□□□□□ -0.37
AP3B1-203ENST00000517940 DSG1Q02413 1049 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 FAM171A1Q5VUB5 890 aa12.71□□□□□ -0.37
AP3B1-203ENST00000517940 WSCD1Q658N2 575 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms