RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 ECHDC2Q86YB7 292 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 SLC13A1Q9BZW2 595 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 AS3MTQ9HBK9 375 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 TJP1Q07157 1748 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 UBTFL6P0CB48 400 aaPredicted RBP14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 IL1R1P14778 569 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 SERPINB6P35237 376 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 PGM1P36871 562 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 CLK2P49760 499 aaKnown RBP14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 RIPK1Q13546 671 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 HADHQ16836 314 aaKnown RBP14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 SMYD3Q9H7B4 428 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
TSPAN17-208ENST00000514705 CAPN9O14815 690 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 SNHG28P0DPA3 235 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 SMAD1Q15797 465 aaKnown RBP14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 CRY2Q49AN0 593 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 ACER1Q8TDN7 264 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 TSSK1BQ9BXA7 367 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 TBC1D10AQ9BXI6 508 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 TXNDC16Q9P2K2 825 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 USP20Q9Y2K6 914 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 NUP188Q5SRE5 1749 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 CCDC22O60826 627 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 ENO1P06733 434 aaKnown RBP14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 GNAT1P11488 350 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 CALB2P22676 271 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 CYP4X1Q8N118 509 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 PPM1NQ8N819 430 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 RNPEPL1Q9HAU8 725 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 PSMC3IPQ9P2W1 217 aaPredicted RBP14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 NXF1Q9UBU9 619 aaKnown RBP14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 COL18A1P39060 1754 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 CYP3A7-CYP3A51PA0A087WV96 503 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 ZBED4O75132 1171 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 ZWINTO95229 277 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 KCNA3P22001 575 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 CYP3A7P24462 503 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 SOX10P56693 466 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 MRPS35P82673 323 aaKnown RBP14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 BMT2Q1RMZ1 405 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 KCNH7Q9NS40 1196 aa14.66□□□□□ -0.06
TSPAN17-208ENST00000514705 TTC8Q8TAM2 541 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 FAM163AQ96GL9 167 aaPredicted RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 WDR18Q9BV38 432 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 SENP1Q9P0U3 644 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 R3HDM2Q9Y2K5 976 aaKnown RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 CHD4Q14839 1912 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 COPEO14579 308 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 P4HA2O15460 535 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 RPA3P35244 121 aaPredicted RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 SMTNL2Q2TAL5 461 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 DARS2Q6PI48 645 aaKnown RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 ATP11CQ8NB49 1132 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 STK32AQ8WU08 396 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 HSPH1Q92598 858 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 TMEM8AQ9HCN3 771 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 TOM1L1O75674 476 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 ETS1P14921 441 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 PSMA2P25787 234 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 FMO1Q01740 532 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 NFX1Q12986 1120 aaKnown RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 C1orf146Q5VVC0 180 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 SPOPLQ6IQ16 392 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 SV2AQ7L0J3 742 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 SDCCAG8Q86SQ7 713 aaPredicted RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 ZNF526Q8TF50 670 aaPredicted RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 FGD4Q96M96 766 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 HSD17B14Q9BPX1 270 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 CHMP2BQ9UQN3 213 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 EPHB1P54762 984 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 THOC5Q13769 683 aaKnown RBP14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 KCTD6Q8NC69 237 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 TMEM121Q9BTD3 319 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 TUBB6Q9BUF5 446 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 LRRC19Q9H756 370 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 PCDHB2Q9Y5E7 798 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 LAMB4A4D0S4 1761 aa14.65□□□□□ -0.06
TSPAN17-208ENST00000514705 UBE4BO95155 1302 aa14.65□□□□□ -0.07
TSPAN17-208ENST00000514705 IQANK1A0A1B0GTG1 560 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 RNF8O76064 485 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 ZCCHC18P0CG32 403 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 OSTNP61366 133 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 ATP13A4Q4VNC1 1196 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 MICALL2Q8IY33 904 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 TEX9Q8N6V9 391 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 MCEEQ96PE7 176 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 RAVER2Q9HCJ3 691 aaKnown RBP14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 KCND2Q9NZV8 630 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 B2RBV5 119 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 MCF2LO15068 1137 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 TAC1P20366 129 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 CENPCQ03188 943 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 VSTM1Q6UX27 236 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 ZSWIM2Q8NEG5 633 aa14.64□□□□□ -0.07
TSPAN17-208ENST00000514705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.073e-6■■□□□ 12.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms