RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 GTSE1Q9NYZ3 720 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 YIPF1Q9Y548 306 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 BTBD18B2RXH4 712 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 ARNTLO00327 626 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 RPP40O75818 363 aaKnown RBP17.46■□□□□ 0.39
DDR1-269ENST00000512725 PAPSS2O95340 614 aaPredicted RBP17.46■□□□□ 0.39
DDR1-269ENST00000512725 ZNF806P0C7X5 589 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 CTHP32929 405 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 LIMK1P53667 647 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 COL9A2Q14055 689 aaPredicted RBP17.46■□□□□ 0.39
DDR1-269ENST00000512725 WDR44Q5JSH3 913 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 STXBP5Q5T5C0 1151 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 CACNA2D4Q7Z3S7 1137 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 KBTBD6Q86V97 674 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 RALGPS2Q86X27 583 aaPredicted RBP17.46■□□□□ 0.39
DDR1-269ENST00000512725 ARID3BQ8IVW6 561 aaPredicted RBP17.46■□□□□ 0.39
DDR1-269ENST00000512725 DDX12PQ92771 950 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 TNFRSF25Q93038 417 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 MTMR9Q96QG7 549 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 TNFSF13BQ9Y275 285 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 GREB1Q4ZG55 1949 aa17.46■□□□□ 0.39
DDR1-269ENST00000512725 CNOT1A5YKK6 2376 aaKnown RBP17.46■□□□□ 0.39
DDR1-269ENST00000512725 MYBPHLA2RUH7 354 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 EXTL3O43909 919 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 OR4Q2P0C623 313 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 RPL9P32969 192 aaKnown RBP17.45■□□□□ 0.38
DDR1-269ENST00000512725 EPHB3P54753 998 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 MLLT6P55198 1093 aaPredicted RBP17.45■□□□□ 0.38
DDR1-269ENST00000512725 TRIM29Q14134 588 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 MRPL58Q14197 206 aaKnown RBP17.45■□□□□ 0.38
DDR1-269ENST00000512725 KIFAP3Q92845 792 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 SUSD3Q96L08 255 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 POLR3CQ9BUI4 534 aaPredicted RBP17.45■□□□□ 0.38
DDR1-269ENST00000512725 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 ATXN3LQ9H3M9 355 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 TIMM13Q9Y5L4 95 aaPredicted RBP17.45■□□□□ 0.38
DDR1-269ENST00000512725 CHD6Q8TD26 2715 aa17.45■□□□□ 0.38
DDR1-269ENST00000512725 PFKFB2O60825 505 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 EPN2O95208 641 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 KCNK5O95279 499 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 ALDH1A3P47895 512 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 EPHA5P54756 1037 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 SHC2P98077 582 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 TNK2Q07912 1038 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 PLD1Q13393 1074 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 ARHGAP29Q52LW3 1261 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 GPR158Q5T848 1215 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 RNF43Q68DV7 783 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 PSAPL1Q6NUJ1 521 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 ALKAL1Q6UXT8 129 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
DDR1-269ENST00000512725 GAB3Q8WWW8 586 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 ACO2Q99798 780 aaKnown RBP17.44■□□□□ 0.38
DDR1-269ENST00000512725 MRPL4Q9BYD3 311 aaKnown RBP17.44■□□□□ 0.38
DDR1-269ENST00000512725 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
DDR1-269ENST00000512725 PROS1P07225 676 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
DDR1-269ENST00000512725 PEX3P56589 373 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
DDR1-269ENST00000512725 FCHO2Q0JRZ9 810 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 DUSP4Q13115 394 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 ARHGAP15Q53QZ3 475 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 XKR4Q5GH76 650 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 USP37Q86T82 979 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 LOXL4Q96JB6 756 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
DDR1-269ENST00000512725 BHMT2Q9H2M3 363 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 MAFFQ9ULX9 164 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 PCDHB8Q9UN66 801 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 SLC27A5Q9Y2P5 690 aa17.43■□□□□ 0.38
DDR1-269ENST00000512725 CITO14578 2027 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 KIF26AQ9ULI4 1882 aaPredicted RBP17.42■□□□□ 0.38
DDR1-269ENST00000512725 C1QTNF9BB2RNN3 333 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 TM4SF5O14894 197 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 C1QTNF9P0C862 333 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 KCNE1P15382 129 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 RPA1P27694 616 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 MPLP40238 635 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 MATR3P43243 847 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDR1-269ENST00000512725 SEZ6Q53EL9 994 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 TMC8Q8IU68 726 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 TMEM130Q8N3G9 435 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 CNTN3Q9P232 1028 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 PHLPP2Q6ZVD8 1323 aa17.42■□□□□ 0.38
DDR1-269ENST00000512725 FRYQ5TBA9 3013 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 SOAT2O75908 522 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 FDPSP14324 419 aaKnown RBP17.41■□□□□ 0.38
DDR1-269ENST00000512725 GABRR2P28476 465 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 NOVA1P51513 510 aaKnown RBP17.41■□□□□ 0.38
DDR1-269ENST00000512725 CDR1P51861 262 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 FOXC1Q12948 553 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 CCINQ13939 588 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 ZNF174Q15697 407 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 TCEAL6Q6IPX3 200 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 PKN3Q6P5Z2 889 aa17.41■□□□□ 0.38
DDR1-269ENST00000512725 UNQ6494/PRO21346Q6UXR6 183 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms